Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 3.1e-159 565.1 289 100.0
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 5.4e-143 511.1 290 92.1
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 3.7e-136 488.4 289 86.9
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 2.6e-113 412.5 251 86.5
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 4.0e-98 362.1 292 70.9
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 4.0e-98 362.1 269 73.6
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 1.5e-97 360.1 297 67.0
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.3e-96 357.1 296 65.9
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 2.2e-96 356.3 285 68.1
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 3.7e-91 339.0 233 75.5
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 1.0e-88 330.9 271 67.2
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 1.7e-88 330.1 207 79.7
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.7e-88 330.1 249 68.7
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 6.5e-88 328.2 241 70.1
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.4e-87 327.0 282 64.5
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.9e-87 326.6 242 70.7
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.9e-87 326.6 243 68.3
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 3.2e-87 325.9 281 65.8
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 4.2e-87 325.5 201 80.1
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 5.5e-87 325.1 282 65.6
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 9.4e-87 324.3 201 79.6
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.4e-87 324.3 284 64.4
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 1.2e-86 323.9 231 71.4
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 1.6e-86 323.6 252 67.9
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 2.1e-86 323.2 250 67.6
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 2.1e-86 323.2 233 70.8
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 2.1e-86 323.2 275 64.4
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.6e-86 322.4 284 64.4
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 3.6e-86 322.4 282 64.5
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 3.6e-86 322.4 262 64.9
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 4.6e-86 322.0 234 70.1
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 2.3e-85 319.7 237 70.0
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 3.0e-85 319.3 201 77.6
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 3.0e-85 319.3 235 69.8
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 3.0e-85 319.3 201 77.6
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 6.7e-85 318.2 215 73.0
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.1e-84 317.4 243 66.3
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.5e-84 317.0 213 73.2
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.5e-84 317.0 213 73.2
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 3.3e-84 315.8 201 75.1
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 3.3e-84 315.8 263 65.4
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 5.7e-84 315.1 201 75.1
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 9.7e-84 314.3 213 72.8
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 9.7e-84 314.3 289 61.2
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.3e-83 313.9 248 66.1
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.2e-83 313.2 250 64.8
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.2e-83 313.2 284 63.7
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.8e-83 312.8 273 62.3
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 3.7e-83 312.4 291 60.1
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 6.3e-83 311.6 206 72.8
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 8.2e-83 311.2 232 69.4
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 1.1e-82 310.8 278 61.2
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.4e-82 310.5 236 67.8
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 6.9e-82 308.1 274 59.9
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.5e-81 307.0 199 73.4
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 2.0e-81 306.6 273 65.2
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.4e-81 305.8 283 60.1
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 5.9e-81 305.1 286 59.8
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 5.9e-81 305.1 286 59.8
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 7.7e-81 304.7 253 62.1
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 2.2e-80 303.1 286 59.4
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 2.2e-80 303.1 263 61.2
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 3.8e-80 302.4 280 60.4
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 5.0e-80 302.0 280 60.4
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 5.0e-80 302.0 287 59.9
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 6.5e-80 301.6 284 59.9
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 6.5e-80 301.6 268 60.4
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 4.2e-79 298.9 288 58.0
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 5.5e-79 298.5 283 58.7
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 5.5e-79 298.5 188 78.2
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 7.2e-79 298.1 286 61.5
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 7.2e-79 298.1 291 57.0
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 9.4e-79 297.7 289 57.4
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 9.4e-79 297.7 286 59.1
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 1.6e-78 297.0 292 58.2
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 2.7e-78 296.2 289 57.4
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 2.7e-78 296.2 288 58.7
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.4e-77 293.9 288 56.9
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.4e-77 293.9 257 59.9
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 3.9e-77 292.4 255 61.6
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.6e-76 289.7 292 56.8
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.2e-75 286.6 213 67.6
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 3.7e-75 285.8 200 71.5
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 5.3e-74 282.0 216 67.6
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 2.6e-73 279.6 279 56.6
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 4.5e-73 278.9 205 68.3
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 2.5e-71 273.1 213 62.9
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 3.2e-71 272.7 266 54.9
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 8.0e-70 268.1 274 53.3
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 2.3e-69 266.5 206 66.5
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.5e-68 263.8 197 64.0
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 4.4e-68 262.3 179 70.4
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.1e-63 247.7 172 69.8
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 6.3e-59 231.9 237 59.1
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 3.1e-58 229.6 212 54.7
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 4.8e-51 205.7 139 74.1
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.1e-50 201.4 219 52.5
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 2.0e-49 200.3 269 45.4
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.3e-48 197.6 226 52.2
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 2.0e-44 183.7 197 47.7
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 3.9e-40 169.5 223 39.9
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 1.2e-36 157.9 151 56.3
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 5.8e-36 155.6 91 81.3
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 6.4e-35 152.1 120 60.0
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 6.0e-33 145.6 96 72.9
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 7.3e-31 138.7 82 79.3
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 2.1e-30 137.1 160 53.8
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 6.8e-29 132.1 200 36.0
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 1.2e-28 131.3 158 49.4
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 6.4e-27 125.6 97 61.9
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 3.4e-20 103.2 77 66.2
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 7.1e-18 95.5 70 67.1
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 7.1e-18 95.5 143 45.5
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 2.1e-17 94.0 68 66.2
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.7e-17 93.6 64 68.8
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 2.5e-15 87.0 80 61.2
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.6e-14 84.3 59 67.8
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 7.6e-12 75.5 58 63.8
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.3e-08 63.9 63 54.0
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 5.6e-07 59.3 108 31.5
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 1.6e-06 57.8 30 80.0


User provided reference genes

Program Settings