Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 2.5e-98 362.1 177 100.0
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 7.5e-79 297.4 177 82.5
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 7.0e-77 290.8 177 81.9
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 4.0e-72 275.0 181 77.3
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 2.0e-71 272.7 177 76.3
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 8.3e-70 267.3 180 76.1
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 9.2e-69 263.8 178 75.3
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 6.4e-62 241.1 176 69.9
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 4.6e-60 235.0 151 71.5
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 2.3e-59 232.6 173 65.9
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 3.0e-59 232.3 178 63.5
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 3.9e-59 231.9 180 62.2
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 1.5e-58 229.9 147 72.8
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 1.6e-57 226.5 180 63.9
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 6.2e-57 224.6 165 66.1
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.1e-56 223.8 180 64.4
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 1.4e-56 223.4 178 63.5
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.8e-56 223.0 141 73.0
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 2.3e-56 222.6 171 60.8
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 3.1e-56 222.2 148 70.3
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 5.2e-56 221.5 175 62.3
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 2.0e-55 219.5 151 66.9
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 2.6e-55 219.2 180 61.1
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 3.4e-55 218.8 173 60.7
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 5.8e-55 218.0 144 70.1
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.3e-54 216.9 151 66.9
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 2.9e-54 215.7 182 61.0
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 4.9e-54 214.9 144 69.4
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 6.4e-54 214.5 144 70.8
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.1e-53 213.8 145 68.3
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.1e-53 213.8 172 61.6
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.4e-53 213.4 220 54.1
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 1.4e-53 213.4 120 85.8
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 2.4e-53 212.6 145 66.9
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 2.4e-53 212.6 145 68.3
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 3.2e-53 212.2 146 66.4
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.2e-53 212.2 137 72.3
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 4.1e-53 211.8 176 60.2
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 7.1e-53 211.1 170 61.8
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 7.1e-53 211.1 145 67.6
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 9.2e-53 210.7 145 66.2
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 9.2e-53 210.7 180 56.1
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 9.2e-53 210.7 178 58.4
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 9.2e-53 210.7 178 58.4
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 9.2e-53 210.7 170 61.2
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 1.2e-52 210.3 145 65.5
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.6e-52 209.9 154 64.9
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 2.1e-52 209.5 146 66.4
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 3.5e-52 208.8 145 66.2
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 1.0e-51 207.2 145 65.5
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.0e-51 207.2 162 61.7
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.0e-51 207.2 160 63.1
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 1.3e-51 206.8 155 63.2
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 3.0e-51 205.7 159 62.3
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 6.6e-51 204.5 136 71.3
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 1.1e-50 203.8 160 63.1
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 1.5e-50 203.4 145 64.8
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.9e-50 203.0 121 78.5
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.5e-50 202.6 176 59.7
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.3e-50 202.2 176 59.7
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 4.3e-50 201.8 146 66.4
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 7.3e-50 201.1 137 67.9
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 7.3e-50 201.1 137 69.3
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 9.6e-50 200.7 130 72.3
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 9.6e-50 200.7 155 57.4
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.2e-49 200.3 111 82.0
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.6e-49 199.9 147 63.3
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.8e-49 199.1 146 63.7
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.8e-49 199.1 146 63.7
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.8e-48 196.4 155 70.3
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 4.0e-48 195.3 135 69.6
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 6.8e-48 194.5 158 60.8
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.2e-47 193.7 152 57.2
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.5e-47 193.4 186 57.5
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.5e-47 193.4 148 64.9
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 2.0e-47 193.0 141 61.7
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 9.9e-47 190.7 187 54.0
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 4.9e-46 188.3 129 70.5
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 4.9e-46 188.3 226 45.6
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 8.4e-46 187.6 151 59.6
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 9.3e-45 184.1 139 60.4
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 6.0e-44 181.4 116 69.8
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 7.8e-44 181.0 186 52.2
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 7.8e-44 181.0 156 57.7
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 6.6e-43 177.9 110 73.6
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 4.3e-42 175.3 174 50.6
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 7.3e-42 174.5 115 66.1
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 4.8e-41 171.8 122 65.6
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 1.4e-40 170.2 106 68.9
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.1e-36 156.4 115 63.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 1.7e-35 153.3 124 60.5
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.5e-34 150.2 95 67.4
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.4e-32 143.7 123 55.3
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 3.1e-32 142.5 112 57.1
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.3e-30 137.1 132 52.3
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 5.4e-29 131.7 149 45.0
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.7e-28 129.4 144 45.8
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.9e-26 123.2 95 57.9
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.4e-24 116.3 146 45.9
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 4.0e-24 115.5 141 41.8
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 5.3e-24 115.2 134 44.8
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 4.2e-21 105.5 64 71.9
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 5.5e-21 105.1 79 65.8
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 7.4e-18 94.7 63 66.7
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 8.2e-17 91.3 92 46.7
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 1.1e-16 90.9 65 64.6


User provided reference genes

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