Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G216900 Glycine max HOM05D017162 ORTHO05D009614 4.4e-65 251.5 164 100.0
Psat7g128240 Pisum sativum HOM05D007874 ORTHO05D009614 9.5e-28 127.5 148 68.2
Phvul.002G093200 Phaseolus vulgaris HOM05D017162 ORTHO05D009614 7.8e-22 107.8 166 62.0
VMungo0251G0414 Vigna mungo HOM05D017162 ORTHO05D009614 6.2e-19 98.2 91 65.9
Glyma.20G013800 Glycine max HOM05D017162 ORTHO05D009614 6.8e-18 94.7 164 59.1
Lalb_Chr05g0219441 Lupinus albus HOM05D007874 ORTHO05D009614 1.1e-15 87.4 138 49.3
Lj4g0027985 Lotus japonicus HOM05D017162 ORTHO05D009614 7.8e-14 81.3 92 56.5
Medtr4g084950 Medicago truncatula HOM05D017162 ORTHO05D009614 7.8e-14 81.3 74 63.5
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 1.0e-13 80.9 106 56.6
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 2.3e-13 79.7 141 38.3
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 3.0e-13 79.3 143 39.2
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 5.1e-13 78.6 166 48.2
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 8.7e-13 77.8 124 40.3
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 7.3e-12 74.7 148 37.8
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 9.6e-12 74.3 123 41.5
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 1.2e-11 73.9 105 53.3
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 3.6e-11 72.4 119 47.1
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 8.1e-11 71.2 129 40.3
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 1.1e-10 70.9 118 41.5
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 4.0e-10 68.9 145 42.1
QL01p001738 Quercus lobata HOM05D007874 ORTHO05D009614 5.2e-10 68.6 144 38.9
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 6.9e-10 68.2 137 44.5
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 1.5e-09 67.0 151 35.8
TWI75G1882 Tripterygium wilfordii HOM05D007874 ORTHO05D009614 2.0e-09 66.6 95 60.0
EL10Ac6g14213 Beta vulgaris HOM05D007874 ORTHO05D009614 2.6e-09 66.2 131 42.7
A09p41670 Brassica napus HOM05D007874 ORTHO05D009614 2.6e-09 66.2 113 50.4
BraA09t39656Z Brassica rapa HOM05D007874 ORTHO05D009614 2.6e-09 66.2 113 50.4
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 5.8e-09 65.1 138 45.7
Potri.010G113100 Populus trichocarpa HOM05D007874 ORTHO05D009614 5.8e-09 65.1 141 48.2
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 9.9e-09 64.3 155 45.2
Haze_11010 Corylus avellana HOM05D007874 ORTHO05D009614 1.3e-08 63.9 150 37.3
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 4.9e-08 62.0 146 39.0
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 4.9e-08 62.0 146 32.2
Gohir.D01G145200 Gossypium hirsutum HOM05D007874 ORTHO05D009614 6.4e-08 61.6 173 35.3
BcaC05g26216 Brassica carinata HOM05D007874 ORTHO05D009614 1.1e-07 60.8 129 44.2
C05p22280 Brassica napus HOM05D007874 ORTHO05D009614 1.1e-07 60.8 129 44.2
BolC5t30927H Brassica oleracea HOM05D007874 ORTHO05D009614 1.1e-07 60.8 129 44.2
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 1.1e-07 60.8 122 46.7
Duzib248G1518 Durio zibethinus HOM05D007874 ORTHO05D009614 1.4e-07 60.5 110 47.3
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 1.4e-07 60.5 141 42.6
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 1.4e-07 60.5 150 37.3
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 4.2e-07 58.9 149 32.2
CiPaw.06G012000 Carya illinoinensis HOM05D007874 ORTHO05D009614 9.3e-07 57.8 141 39.7
AL2G30530 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 1.2e-06 57.4 106 52.8
AT1G70985 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 3.5e-06 55.8 141 39.0
Ca_18728_v3 Cicer arietinum L. HOM05D017162 ORTHO05D009614 7.8e-06 54.7 36 77.8


User provided reference genes

Program Settings