Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G216800 Glycine max HOM05D011582 ORTHO05D010299 1.2e-55 219.9 143 100.0
Glyma.20G013700 Glycine max HOM05D011582 ORTHO05D010299 3.7e-44 181.8 142 90.8
Phvul.002G093100 Phaseolus vulgaris HOM05D011582 ORTHO05D010299 3.3e-32 142.1 143 76.9
VMungo0251G2113 Vigna mungo HOM05D011582 ORTHO05D010299 1.0e-30 137.1 144 76.4
Lj4g0017408 Lotus japonicus HOM05D011582 ORTHO05D010299 1.6e-23 113.2 148 65.5
Ca_18727_v3 Cicer arietinum L. HOM05D011582 ORTHO05D010299 1.8e-22 109.8 142 66.2
Medtr4g084970 Medicago truncatula HOM05D011582 ORTHO05D010299 4.0e-22 108.6 143 62.9
TPR.G35414 Trifolium pratense HOM05D011582 ORTHO05D010299 3.4e-21 105.5 138 66.7
Lalb_Chr05g0219431 Lupinus albus HOM05D011582 ORTHO05D010299 1.6e-18 96.7 144 62.5
Psat7g129520 Pisum sativum HOM05D011582 ORTHO05D010299 2.1e-18 96.3 145 57.9
Glyma.07G165300 Glycine max HOM05D011582 ORTHO05D010299 1.0e-17 94.0 152 59.9
Lalb_Chr04g0258631 Lupinus albus HOM05D011582 ORTHO05D010299 2.5e-16 89.4 144 54.2
Lalb_Chr10g0096201 Lupinus albus HOM05D011582 ORTHO05D010299 1.1e-14 84.0 148 48.0
Lj2g0021028 Lotus japonicus HOM05D011582 ORTHO05D010299 2.4e-11 72.8 157 54.1
Duzib251G0093 Durio zibethinus HOM05D009257 ORTHO05D010299 9.2e-11 70.9 142 47.2
Dinv07644 Davidia involucrata HOM05D009257 ORTHO05D010622 1.5e-08 63.5 128 60.2
Gohir.A03G121900 Gossypium hirsutum HOM05D009257 ORTHO05D010299 2.8e-07 59.3 146 43.8
Gohir.D02G144800 Gossypium hirsutum HOM05D009257 ORTHO05D010299 2.8e-07 59.3 146 43.8
Gorai.005G162200 Gossypium raimondii HOM05D009257 ORTHO05D010299 2.8e-07 59.3 146 47.3
Medtr1g030850 Medicago truncatula HOM05D033774 ORTHO05D010299 2.8e-07 59.3 160 46.2
Psat6g042880 Pisum sativum HOM05D033774 ORTHO05D010299 3.6e-07 58.9 158 48.7
Phvul.003G023700 Phaseolus vulgaris HOM05D011582 ORTHO05D010299 6.2e-07 58.2 174 45.4
Potri.010G113300 Populus trichocarpa HOM05D009257 ORTHO05D010622 6.2e-07 58.2 114 58.8
DCAR_026775 Daucus carota HOM05D009525 ORTHO05D010622 8.1e-07 57.8 132 47.0
CSS0046736 Camellia sinensis var. sinensis HOM05D009257 ORTHO05D010622 1.4e-06 57.0 145 43.4
Duzib248G0803 Durio zibethinus HOM05D009257 ORTHO05D010299 1.4e-06 57.0 146 46.6
Duzib268G0344 Durio zibethinus HOM05D009257 ORTHO05D010299 1.4e-06 57.0 147 44.2
Manes.15G127400 Manihot esculenta HOM05D009257 ORTHO05D010622 1.4e-06 57.0 104 62.5
Manes.17G076800 Manihot esculenta HOM05D009257 ORTHO05D010622 1.4e-06 57.0 123 56.9
CANSAT01G1038 Cannabis sativa HOM05D011582 ORTHO05D013822 1.8e-06 56.6 134 47.8
Haze_11006 Corylus avellana HOM05D012022 ORTHO05D013822 1.8e-06 56.6 53 58.5
Thecc.02G281400 Theobroma cacao HOM05D009257 ORTHO05D010299 1.8e-06 56.6 151 42.4
TWI75G1765 Tripterygium wilfordii HOM05D009257 ORTHO05D010622 3.1e-06 55.8 109 60.6
Sed0015271 Sechium edule HOM05D031424 ORTHO05D010622 4.0e-06 55.5 129 49.6
Cfa008608 Carpinus fangiana HOM05D012022 ORTHO05D013822 5.2e-06 55.1 53 56.6


User provided reference genes

Program Settings