Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G210500 Glycine max HOM05D000574 ORTHO05D215501 1.6e-32 142.1 71 100.0
Phvul.003G150300 Phaseolus vulgaris HOM05D000574 ORTHO05D003995 3.4e-14 81.3 71 66.2
Glyma.17G067700 Glycine max HOM05D000574 ORTHO05D003995 5.8e-14 80.5 71 66.2
Psat4g010720 Pisum sativum HOM05D000574 ORTHO05D003995 1.7e-13 79.0 71 63.4
VMungo1215G0757 Vigna mungo HOM05D000574 ORTHO05D003995 2.9e-13 78.2 71 64.8
Glyma.13G092700 Glycine max HOM05D000574 ORTHO05D003995 1.2e-11 72.8 72 62.5
Lalb_Chr12g0199121 Lupinus albus HOM05D000574 ORTHO05D003995 2.1e-11 72.0 71 57.7
TPR.G5360 Trifolium pratense HOM05D000574 ORTHO05D003995 1.0e-10 69.7 71 60.6
Lalb_Chr13g0300461 Lupinus albus HOM05D000574 ORTHO05D003995 2.3e-10 68.6 71 56.3
Lj4g0009510 Lotus japonicus HOM05D000574 ORTHO05D003995 3.0e-10 68.2 71 57.7
Medtr4g129230 Medicago truncatula HOM05D000574 ORTHO05D003995 3.0e-10 68.2 71 59.2
Lalb_Chr07g0180151 Lupinus albus HOM05D000574 ORTHO05D003995 8.6e-10 66.6 71 56.3
TWI32G0801 Tripterygium wilfordii HOM05D000574 ORTHO05D003995 8.6e-10 66.6 70 55.7
Sp6g19400 Schrenkiella parvula HOM05D000574 ORTHO05D003995 1.9e-09 65.5 70 51.4
arahy.Tifrunner.gnm1.ann1.9BS001 Arachis hypogaea HOM05D000574 ORTHO05D003995 5.6e-09 63.9 71 59.2
arahy.Tifrunner.gnm1.ann1.J9PLIE Arachis hypogaea HOM05D000574 ORTHO05D003995 7.3e-09 63.5 71 60.6
BraA02t05900Z Brassica rapa HOM05D000574 ORTHO05D003995 9.5e-09 63.2 72 51.4
Thhalv10012564m.g Eutrema salsugineum HOM05D000574 ORTHO05D003995 9.5e-09 63.2 70 48.6
BcaC03g14131 Brassica carinata HOM05D000574 ORTHO05D003995 2.8e-08 61.6 72 50.0
A02p08280 Brassica napus HOM05D000574 ORTHO05D003995 2.8e-08 61.6 72 50.0
C02p13970 Brassica napus HOM05D000574 ORTHO05D003995 2.8e-08 61.6 72 50.0
BolC2t07515H Brassica oleracea HOM05D000574 ORTHO05D003995 2.8e-08 61.6 72 50.0
BcaB05g22369 Brassica carinata HOM05D000574 ORTHO05D003995 3.6e-08 61.2 73 49.3
AT5G57710 Arabidopsis thaliana HOM05D000574 ORTHO05D003995 1.1e-07 59.7 73 49.3
Manes.06G026400 Manihot esculenta HOM05D000574 ORTHO05D003995 1.1e-07 59.7 70 50.0
Carub.0008s1822 Capsella rubella HOM05D000574 ORTHO05D003995 1.4e-07 59.3 73 49.3
TWI34G1191 Tripterygium wilfordii HOM05D000574 ORTHO05D003995 1.4e-07 59.3 70 50.0
CARHR271460 Cardamine hirsuta HOM05D000574 ORTHO05D003995 1.8e-07 58.9 73 47.9
Cpa.g.sc75.5 Carica papaya HOM05D000574 ORTHO05D003995 1.8e-07 58.9 70 51.4
TAR626G0730 Trochodendron aralioides HOM05D000574 ORTHO05D003995 3.1e-07 58.2 71 46.5
BcaB08g36131 Brassica carinata HOM05D000574 ORTHO05D003995 5.2e-07 57.4 70 47.1
Hma1.2p1_0921F.1_g236690 Hydrangea macrophylla HOM05D000574 ORTHO05D003995 5.2e-07 57.4 70 48.6
Dinv41294 Davidia involucrata HOM05D000574 ORTHO05D003995 6.8e-07 57.0 70 47.1
AUR62040287 Chenopodium quinoa HOM05D000574 ORTHO05D003995 8.9e-07 56.6 67 47.8
EL10Ac8g18253 Beta vulgaris HOM05D000574 ORTHO05D003995 1.2e-06 56.2 70 45.7
Manes.14G147300 Manihot esculenta HOM05D000574 ORTHO05D003995 1.2e-06 56.2 70 42.9
TAR625G0053 Trochodendron aralioides HOM05D000574 ORTHO05D003995 1.2e-06 56.2 71 46.5
Actinidia24023 Actinidia chinensis HOM05D000574 ORTHO05D003995 2.0e-06 55.5 70 50.0
Aa31LG3G13550 Aethionema arabicum HOM05D000574 ORTHO05D003995 2.0e-06 55.5 73 47.9
Oeu054242.1 Olea europaea HOM05D000574 ORTHO05D003995 2.6e-06 55.1 70 44.3
AL8G33750 Arabidopsis lyrata HOM05D000574 ORTHO05D003995 3.4e-06 54.7 73 46.6
BcaC04g19934 Brassica carinata HOM05D000574 ORTHO05D003995 3.4e-06 54.7 70 45.7
A10p15100 Brassica napus HOM05D000574 ORTHO05D003995 3.4e-06 54.7 70 45.7
C09p49580 Brassica napus HOM05D000574 ORTHO05D003995 3.4e-06 54.7 70 45.7
BolC9t57813H Brassica oleracea HOM05D000574 ORTHO05D003995 3.4e-06 54.7 70 45.7
BraA10t43593Z Brassica rapa HOM05D000574 ORTHO05D003995 3.4e-06 54.7 70 45.7
AUR62039978 Chenopodium quinoa HOM05D000574 ORTHO05D003995 3.4e-06 54.7 67 46.3
Cc06_g13800 Coffea canephora HOM05D000574 ORTHO05D003995 4.4e-06 54.3 70 47.1
DCAR_017947 Daucus carota HOM05D000574 ORTHO05D003995 4.4e-06 54.3 73 47.9
Actinidia04113 Actinidia chinensis HOM05D000574 ORTHO05D003995 5.8e-06 53.9 73 46.6
Sed0008408 Sechium edule HOM05D000574 ORTHO05D003995 5.8e-06 53.9 73 42.5
GSVIVG01032247001 Vitis vinifera HOM05D000574 ORTHO05D003995 5.8e-06 53.9 73 45.2
Cfa013537 Carpinus fangiana HOM05D000574 ORTHO05D003995 7.6e-06 53.5 70 48.6
CiPaw.08G039300 Carya illinoinensis HOM05D000574 ORTHO05D003995 7.6e-06 53.5 71 46.5
Duzib168G1018 Durio zibethinus HOM05D000574 ORTHO05D003995 7.6e-06 53.5 70 45.7
Gohir.D08G255500 Gossypium hirsutum HOM05D000574 ORTHO05D003995 7.6e-06 53.5 67 46.3
CSS0007446 Camellia sinensis var. sinensis HOM05D000574 ORTHO05D003995 9.9e-06 53.1 70 48.6
Gorai.004G272800 Gossypium raimondii HOM05D000574 ORTHO05D003995 9.9e-06 53.1 67 44.8
Oeu052238.1 Olea europaea HOM05D000574 ORTHO05D003995 9.9e-06 53.1 70 40.0
Potri.018G097300 Populus trichocarpa HOM05D000574 ORTHO05D003995 9.9e-06 53.1 70 45.7
QL02p096073 Quercus lobata HOM05D000574 ORTHO05D003995 9.9e-06 53.1 70 48.6
Thecc.09G163400 Theobroma cacao HOM05D000574 ORTHO05D003995 9.9e-06 53.1 70 44.3


User provided reference genes

Program Settings