Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 6.3e-76 287.3 144 100.0
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.6e-71 272.7 144 95.1
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 4.1e-59 231.5 140 83.6
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 6.6e-57 224.2 136 86.0
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 7.3e-48 194.1 145 71.0
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 2.1e-47 192.6 144 70.1
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 5.2e-46 188.0 144 67.4
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 1.5e-45 186.4 146 69.9
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 2.6e-45 185.7 145 68.3
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 4.4e-45 184.9 144 68.8
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 7.5e-45 184.1 145 69.0
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 1.7e-44 183.0 149 68.5
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 5.4e-43 177.9 146 67.8
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 5.4e-43 177.9 146 67.1
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 3.5e-42 175.3 143 65.0
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 3.0e-41 172.2 127 68.5
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 8.1e-39 164.1 149 65.1
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 4.0e-38 161.8 145 59.3
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 5.2e-38 161.4 133 60.9
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 3.4e-37 158.7 145 64.1
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 1.3e-36 156.8 144 61.8
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 1.9e-35 152.9 142 59.9
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 2.4e-35 152.5 141 58.2
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 4.1e-35 151.8 136 57.4
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 2.1e-34 149.4 143 56.6
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 7.8e-34 147.5 141 56.0
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 7.8e-34 147.5 141 56.7
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 2.3e-33 146.0 137 57.7
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 3.9e-33 145.2 137 58.4
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 5.1e-33 144.8 141 55.3
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 5.1e-33 144.8 143 55.2
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 8.6e-33 144.1 142 57.0
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 1.5e-32 143.3 143 55.9
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 7.3e-32 141.0 141 56.0
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 2.8e-31 139.0 146 52.1
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 8.1e-31 137.5 142 56.3
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.4e-30 136.7 148 52.0
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 1.4e-30 136.7 141 53.2
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.8e-30 136.3 141 52.5
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 6.8e-30 134.4 145 51.7
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 1.2e-29 133.7 142 52.1
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 5.8e-29 131.3 144 50.0
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 5.8e-29 131.3 143 51.7
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 1.3e-28 130.2 136 52.2
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 2.2e-28 129.4 141 49.6
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.9e-28 128.3 144 51.4
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.1e-27 127.1 149 51.0
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.1e-27 127.1 149 51.0
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.1e-27 127.1 140 52.1
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.4e-27 125.9 149 51.0
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 3.2e-27 125.6 145 49.0
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 3.2e-27 125.6 137 52.6
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 4.1e-27 125.2 146 46.6
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 1.6e-26 123.2 132 53.8
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 2.7e-26 122.5 141 46.1
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 3.0e-25 119.0 148 50.0
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 6.6e-25 117.9 143 46.2
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 1.1e-24 117.1 123 52.8
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 1.1e-24 117.1 143 50.3
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 5.6e-24 114.8 151 48.3
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.6e-23 113.2 140 46.4
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.6e-23 113.2 151 48.3
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 1.6e-23 113.2 126 50.8
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 3.6e-23 112.1 144 45.8
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 8.1e-23 110.9 144 47.9
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 3.1e-22 109.0 141 46.8
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 5.2e-22 108.2 141 45.4
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 5.8e-21 104.8 133 42.9
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 3.8e-20 102.1 102 58.8
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 8.4e-20 100.9 86 65.1
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 1.1e-19 100.5 142 42.3
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 2.4e-19 99.4 149 43.6
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 4.2e-19 98.6 122 49.2
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 5.4e-19 98.2 138 43.5
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 1.2e-18 97.1 147 40.8
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 1.6e-18 96.7 146 40.4
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 2.1e-18 96.3 146 41.1
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 6.0e-18 94.7 138 42.0
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 6.0e-18 94.7 124 43.5
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 7.8e-18 94.4 142 45.8
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 2.3e-17 92.8 129 44.2
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 3.0e-17 92.4 127 46.5
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 1.3e-15 87.0 142 39.4
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 1.6e-15 86.7 119 48.7
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 3.6e-15 85.5 133 42.1
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 8.1e-15 84.3 126 40.5
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.4e-14 82.8 120 42.5
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 3.1e-14 82.4 94 47.9
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 2.0e-13 79.7 126 39.7
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 5.8e-13 78.2 146 37.7
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.4e-11 73.6 135 39.3
arahy.Tifrunner.gnm1.ann1.PE4GJ8 Arachis hypogaea HOM05D000372 ORTHO05D009420 1.9e-11 73.2 54 70.4
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 7.9e-10 67.8 86 41.9
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.8e-09 66.6 93 39.8
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.1e-08 63.9 67 55.2
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 5.6e-08 61.6 73 45.2
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 1.6e-07 60.1 69 50.7
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 2.8e-07 59.3 113 37.2
Mapoly0541s0001 Marchantia polymorpha HOM05D007507 ORTHO05D009420 4.8e-07 58.5 75 50.7
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 4.8e-07 58.5 127 37.0
Hund21209 Selenicereus undatus HOM05D007507 ORTHO05D009420 4.8e-07 58.5 68 50.0
Gohir.A05G096000 Gossypium hirsutum HOM05D003527 ORTHO05D004099 1.4e-06 57.0 116 37.1
Thecc.09G322900 Theobroma cacao HOM05D003527 ORTHO05D004099 1.8e-06 56.6 117 36.8
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 1.8e-06 56.6 118 33.9
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 2.4e-06 56.2 111 36.0
TWI79G0031 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 2.4e-06 56.2 111 36.0
Gohir.D05G096200 Gossypium hirsutum HOM05D003527 ORTHO05D004099 3.1e-06 55.8 116 34.5
Gorai.009G099700 Gossypium raimondii HOM05D003527 ORTHO05D004099 3.1e-06 55.8 116 34.5
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 3.1e-06 55.8 113 38.1
ATR1053G001 Amborella trichopoda HOM05D007507 ORTHO05D009420 6.9e-06 54.7 52 53.8
Glyma.08G358400 Glycine max HOM05D003527 ORTHO05D004099 6.9e-06 54.7 69 46.4
Lsat_1_v5_gn_8_75920 Lactuca sativa HOM05D003527 ORTHO05D004099 6.9e-06 54.7 139 31.7
Phvul.008G099800 Phaseolus vulgaris HOM05D003527 ORTHO05D004099 6.9e-06 54.7 69 47.8
Sabra16G0144000 Salix brachista HOM05D003527 ORTHO05D004099 6.9e-06 54.7 112 38.4
Manes.04G034300 Manihot esculenta HOM05D003527 ORTHO05D004099 9.0e-06 54.3 125 34.4
Peaxi162Scf00165g01520 Petunia axillaris HOM05D003527 ORTHO05D004099 9.0e-06 54.3 66 48.5


User provided reference genes

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