Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 1.2e-50 203.0 108 100.0
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 1.3e-46 189.5 108 93.5
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 6.9e-43 177.2 112 83.9
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 8.4e-41 170.2 114 80.7
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 8.7e-38 160.2 98 84.7
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 4.3e-37 157.9 100 83.0
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 6.3e-36 154.1 103 79.6
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 1.1e-35 153.3 97 82.5
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 4.1e-35 151.4 95 83.2
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 1.0e-33 146.7 97 80.4
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 1.0e-33 146.7 97 80.4
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 6.5e-33 144.1 96 82.3
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 6.5e-33 144.1 101 77.2
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.1e-32 143.3 95 78.9
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 4.2e-32 141.4 95 76.8
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 5.5e-32 141.0 95 80.0
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 7.2e-32 140.6 97 78.4
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.1e-31 139.0 97 81.4
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.7e-31 138.7 98 74.5
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 4.6e-31 137.9 97 76.3
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.6e-31 137.9 100 73.0
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 4.6e-31 137.9 95 78.9
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 6.1e-31 137.5 95 77.9
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 6.1e-31 137.5 101 70.3
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 7.9e-31 137.1 100 73.0
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.4e-30 136.3 90 77.8
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.4e-30 136.3 95 77.9
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.3e-30 135.6 101 74.3
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.3e-30 135.6 96 77.1
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 2.3e-30 135.6 105 73.3
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 2.3e-30 135.6 95 78.9
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 3.9e-30 134.8 97 79.4
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 3.9e-30 134.8 95 75.8
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 3.9e-30 134.8 95 75.8
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 3.9e-30 134.8 95 74.7
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 2.5e-29 132.1 95 78.9
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.3e-29 131.7 95 75.8
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 7.4e-29 130.6 97 75.3
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 7.4e-29 130.6 90 76.7
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.7e-28 129.4 95 77.9
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 1.7e-28 129.4 97 75.3
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 3.7e-28 128.3 90 74.4
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.8e-27 125.9 103 71.8
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 3.1e-27 125.2 94 75.5
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 6.9e-27 124.0 90 78.9
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 6.9e-27 124.0 94 71.3
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 9.1e-27 123.6 102 71.6
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 1.5e-26 122.9 88 77.3
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 2.6e-26 122.1 100 70.0
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 3.4e-26 121.7 95 72.6
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 4.5e-26 121.3 90 74.4
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 5.9e-26 120.9 90 76.7
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.3e-25 119.8 90 75.6
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.7e-25 119.4 95 72.6
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 3.8e-25 118.2 100 66.0
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 5.0e-25 117.9 94 71.3
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 6.5e-25 117.5 96 65.6
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 8.5e-25 117.1 95 64.2
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.1e-24 116.7 97 70.1
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.9e-24 115.9 101 64.4
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.9e-24 115.9 94 71.3
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 3.2e-24 115.2 90 77.8
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 3.2e-24 115.2 95 70.5
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 4.2e-24 114.8 95 70.5
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 9.4e-24 113.6 89 69.7
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 9.4e-24 113.6 90 71.1
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 1.6e-23 112.8 95 61.1
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 1.6e-23 112.8 95 61.1
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 2.1e-23 112.5 90 71.1
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 2.7e-23 112.1 97 63.9
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 2.7e-23 112.1 95 61.1
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 3.6e-23 111.7 89 65.2
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 3.6e-23 111.7 95 60.0
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 4.7e-23 111.3 90 63.3
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 4.7e-23 111.3 95 61.1
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 7.9e-23 110.5 95 67.4
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.8e-22 109.4 101 58.4
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.8e-22 109.4 80 76.2
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 2.3e-22 109.0 107 57.9
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 3.9e-22 108.2 96 62.5
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 5.1e-22 107.8 101 63.4
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.7e-20 102.8 89 60.7
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.7e-20 102.8 90 65.6
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 2.2e-20 102.4 147 47.6
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 2.8e-20 102.1 98 59.2
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 2.8e-20 102.1 95 60.0
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.7e-20 101.7 127 51.2
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 3.7e-20 101.7 82 69.5
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 8.2e-20 100.5 113 50.4
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 8.2e-20 100.5 67 79.1
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 4.1e-19 98.2 97 56.7
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 1.5e-18 96.3 81 70.4
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.3e-17 93.2 84 69.0
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 3.8e-17 91.7 89 57.3
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 5.0e-17 91.3 84 60.7
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 5.0e-17 91.3 84 66.7
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 8.5e-17 90.5 66 77.3
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 4.2e-16 88.2 91 61.5
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 6.7e-14 80.9 80 55.0
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 5.7e-13 77.8 95 48.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.7e-12 76.3 112 45.5
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 1.4e-11 73.2 96 46.9
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.5e-08 62.4 98 44.9
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 6.7e-06 54.3 98 39.8


User provided reference genes

Program Settings