Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 5.8e-43 177.2 91 100.0
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 3.8e-42 174.5 89 100.0
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 8.1e-37 156.8 87 89.7
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.4e-36 156.0 87 88.5
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 4.0e-36 154.5 86 88.4
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 4.0e-36 154.5 85 91.8
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 6.9e-36 153.7 86 88.4
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 9.0e-36 153.3 91 83.5
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 9.0e-36 153.3 91 83.5
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 1.5e-35 152.5 85 88.2
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 1.5e-35 152.5 87 86.2
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 1.5e-35 152.5 85 87.1
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.0e-35 152.1 90 83.3
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 2.6e-35 151.8 88 86.4
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 3.4e-35 151.4 85 87.1
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 3.4e-35 151.4 82 89.0
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 7.6e-35 150.2 86 86.0
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 9.9e-35 149.8 90 82.2
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 9.9e-35 149.8 90 82.2
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 9.9e-35 149.8 90 82.2
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 9.9e-35 149.8 90 82.2
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 1.3e-34 149.4 90 82.2
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 2.2e-34 148.7 89 82.0
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 2.2e-34 148.7 82 87.8
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 2.2e-34 148.7 89 82.0
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 3.8e-34 147.9 90 81.1
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 3.8e-34 147.9 86 84.9
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 6.4e-34 147.1 90 80.0
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 6.4e-34 147.1 90 80.0
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 8.4e-34 146.7 93 81.7
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 1.1e-33 146.4 89 82.0
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 1.1e-33 146.4 83 85.5
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 1.4e-33 146.0 88 81.8
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 1.9e-33 145.6 87 83.9
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 2.4e-33 145.2 89 79.8
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 2.4e-33 145.2 92 78.3
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 2.4e-33 145.2 88 81.8
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 2.4e-33 145.2 85 83.5
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 3.2e-33 144.8 87 81.6
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 3.2e-33 144.8 89 80.9
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 4.2e-33 144.4 88 79.5
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 4.2e-33 144.4 88 81.8
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 4.2e-33 144.4 89 83.1
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 7.1e-33 143.7 83 85.5
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 7.1e-33 143.7 83 84.3
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 7.1e-33 143.7 89 82.0
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 7.1e-33 143.7 97 79.4
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 7.1e-33 143.7 87 83.9
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 9.3e-33 143.3 87 81.6
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 1.2e-32 142.9 85 82.4
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 1.6e-32 142.5 89 76.4
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 2.1e-32 142.1 83 83.1
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 2.1e-32 142.1 89 78.7
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 2.7e-32 141.7 88 76.1
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 2.7e-32 141.7 90 73.3
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 3.5e-32 141.4 89 78.7
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 3.5e-32 141.4 84 84.5
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 4.6e-32 141.0 89 79.8
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 4.6e-32 141.0 81 82.7
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 1.0e-31 139.8 80 86.2
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 1.0e-31 139.8 88 78.4
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 1.3e-31 139.4 78 85.9
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 1.3e-31 139.4 88 78.4
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.8e-31 139.0 82 81.7
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 1.8e-31 139.0 92 76.1
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 1.8e-31 139.0 88 75.0
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 1.8e-31 139.0 82 82.9
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 2.3e-31 138.7 91 74.7
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 2.3e-31 138.7 87 78.2
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 3.0e-31 138.3 89 76.4
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 3.9e-31 137.9 87 77.0
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 3.9e-31 137.9 87 78.2
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 5.1e-31 137.5 85 78.8
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 5.1e-31 137.5 80 85.0
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 5.1e-31 137.5 80 85.0
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 5.1e-31 137.5 80 85.0
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 6.7e-31 137.1 89 74.2
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 6.7e-31 137.1 90 73.3
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 6.7e-31 137.1 90 73.3
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 6.7e-31 137.1 90 73.3
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 6.7e-31 137.1 82 82.9
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 6.7e-31 137.1 89 76.4
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 8.7e-31 136.7 93 74.2
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 8.7e-31 136.7 81 80.2
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 8.7e-31 136.7 87 75.9
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 8.7e-31 136.7 87 77.0
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 8.7e-31 136.7 78 84.6
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 1.1e-30 136.3 87 78.2
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 1.5e-30 136.0 89 74.2
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 1.5e-30 136.0 118 63.6
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 1.9e-30 135.6 82 78.0
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 1.9e-30 135.6 82 78.0
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 2.5e-30 135.2 82 78.0
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 3.3e-30 134.8 82 78.0
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 5.6e-30 134.0 83 78.3
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 5.6e-30 134.0 80 78.8
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 5.6e-30 134.0 88 76.1
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 5.6e-30 134.0 83 78.3
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 9.6e-30 133.3 89 73.0
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 9.6e-30 133.3 89 73.0
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 9.6e-30 133.3 80 78.8
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 1.3e-29 132.9 82 78.0
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 2.8e-29 131.7 103 66.0
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 4.8e-29 131.0 78 80.8
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 4.8e-29 131.0 85 75.3
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 1.4e-28 129.4 83 78.3
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 4.0e-28 127.9 94 69.1
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 4.5e-27 124.4 89 70.8
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 1.3e-26 122.9 78 79.5
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 4.2e-25 117.9 78 71.8
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 1.8e-23 112.5 88 63.6
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 6.7e-23 110.5 142 47.2
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 6.7e-23 110.5 141 47.5
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 8.7e-23 110.2 68 79.4
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 1.5e-22 109.4 78 67.9
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 1.3e-21 106.3 62 83.9
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 2.6e-19 98.6 63 74.6
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 1.6e-16 89.4 92 51.1
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 2.3e-15 85.5 57 75.4
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 2.3e-15 85.5 57 75.4
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 2.3e-15 85.5 57 75.4
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 5.3e-12 74.3 49 73.5
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 1.2e-08 63.2 45 71.1


User provided reference genes

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