Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G178700 Glycine max HOM05D000733 ORTHO05D000644 1.1e-60 236.5 120 100.0
Glyma.19G260500 Glycine max HOM05D000733 ORTHO05D000644 1.2e-16 90.1 56 82.1
Phvul.009G258400 Phaseolus vulgaris HOM05D000733 ORTHO05D000644 3.0e-15 85.5 56 78.6
VMungo1309G0551 Vigna mungo HOM05D000733 ORTHO05D000644 3.0e-15 85.5 56 78.6
Glyma.03G261400 Glycine max HOM05D000733 ORTHO05D000644 8.8e-15 84.0 56 76.8
Lalb_Chr15g0076561 Lupinus albus HOM05D000733 ORTHO05D000644 1.7e-13 79.7 56 67.9
Ca_09550_v3 Cicer arietinum L. HOM05D000733 ORTHO05D000644 8.3e-13 77.4 56 67.9
Lalb_Chr04g0254141 Lupinus albus HOM05D000733 ORTHO05D000644 1.1e-12 77.0 56 62.5
Psat5g200280 Pisum sativum HOM05D000733 ORTHO05D000644 7.0e-12 74.3 56 62.5
Medtr7g118270 Medicago truncatula HOM05D000733 ORTHO05D000644 9.1e-12 73.9 56 64.3
TPR.G4748 Trifolium pratense HOM05D000733 ORTHO05D000644 9.1e-12 73.9 53 67.9
Lj1g0007838 Lotus japonicus HOM05D000733 ORTHO05D000644 2.0e-11 72.8 56 58.9
Haze_15738 Corylus avellana HOM05D000733 ORTHO05D000644 2.7e-11 72.4 57 63.2
Cfa003731 Carpinus fangiana HOM05D000733 ORTHO05D000644 3.5e-11 72.0 57 64.9
CiPaw.01G083300 Carya illinoinensis HOM05D000733 ORTHO05D000644 3.5e-11 72.0 57 61.4
Lj9C608T1 Lonicera japonica HOM05D000733 ORTHO05D000644 3.5e-11 72.0 56 60.7
Prupe.2G198600 Prunus persica HOM05D000733 ORTHO05D000644 5.9e-11 71.2 56 60.7
Medtr8g024250 Medicago truncatula HOM05D000733 ORTHO05D000644 1.0e-10 70.5 56 58.9
Solyc10g005040.4 Solanum lycopersicum HOM05D000733 ORTHO05D000644 1.7e-10 69.7 57 57.9
TPR.G19831 Trifolium pratense HOM05D000733 ORTHO05D000644 1.7e-10 69.7 68 51.5
Psat4g164120 Pisum sativum HOM05D000733 ORTHO05D000644 2.3e-10 69.3 56 55.4
Sopen10g001070 Solanum pennellii HOM05D000733 ORTHO05D000644 2.3e-10 69.3 57 56.1
PGSC0003DMG400011296 Solanum tuberosum HOM05D000733 ORTHO05D000644 2.3e-10 69.3 57 56.1
MBI12_g14505_MAGBIO Magnolia biondii HOM05D000733 ORTHO05D000644 2.9e-10 68.9 56 62.5
Peaxi162Scf00313g00026 Petunia axillaris HOM05D000733 ORTHO05D000644 2.9e-10 68.9 56 57.1
Atru.chr5.773 Acer truncatum HOM05D000733 ORTHO05D000644 3.8e-10 68.6 56 58.9
QL08p047342 Quercus lobata HOM05D000733 ORTHO05D000644 5.0e-10 68.2 56 58.9
CANSAT56G1378 Cannabis sativa HOM05D000733 ORTHO05D000644 6.6e-10 67.8 57 61.4
VMungo0331G1334 Vigna mungo HOM05D000733 ORTHO05D000644 6.6e-10 67.8 56 57.1
Eucgr.A02388 Eucalyptus grandis HOM05D000733 ORTHO05D000644 8.6e-10 67.4 56 53.6
MD07G1160200 Malus domestica HOM05D000733 ORTHO05D000644 8.6e-10 67.4 56 57.1
Nitab4.5_0002053g0070 Nicotiana tabacum HOM05D000733 ORTHO05D000644 1.5e-09 66.6 56 53.6
CAN.G1174.3 Capsicum annuum HOM05D000733 ORTHO05D000644 1.9e-09 66.2 57 54.4
Glyma.07G049300 Glycine max HOM05D000733 ORTHO05D000644 1.9e-09 66.2 56 57.1
Phvul.010G119800 Phaseolus vulgaris HOM05D000733 ORTHO05D000644 1.9e-09 66.2 56 55.4
Nn3g18791 Nelumbo nucifera HOM05D000733 ORTHO05D000644 2.5e-09 65.9 56 57.1
Cc02_g39970 Coffea canephora HOM05D000733 ORTHO05D000644 3.3e-09 65.5 57 54.4
PGR004G1369 Punica granatum HOM05D000733 ORTHO05D000644 4.2e-09 65.1 60 51.7
Dinv34260 Davidia involucrata HOM05D001057 ORTHO05D003212 7.2e-09 64.3 58 55.2
Potri.002G180000 Populus trichocarpa HOM05D000733 ORTHO05D000644 7.2e-09 64.3 56 57.1
Potri.014G106100 Populus trichocarpa HOM05D000733 ORTHO05D000644 7.2e-09 64.3 57 57.9
TAR375G0206 Trochodendron aralioides HOM05D000733 ORTHO05D000644 7.2e-09 64.3 56 55.4
Ca_26488_v3 Cicer arietinum L. HOM05D000733 ORTHO05D000644 9.5e-09 63.9 68 47.1
Lj3g0019504 Lotus japonicus HOM05D000733 ORTHO05D000644 9.5e-09 63.9 68 47.1
CiPaw.02G045000 Carya illinoinensis HOM05D000733 ORTHO05D000644 1.2e-08 63.5 56 55.4
Glyma.16G017900 Glycine max HOM05D000733 ORTHO05D000644 1.2e-08 63.5 56 51.8
Sabra14G0078300 Salix brachista HOM05D000733 ORTHO05D000644 1.2e-08 63.5 57 56.1
GSVIVG01027444001 Vitis vinifera HOM05D000733 ORTHO05D000644 1.2e-08 63.5 56 53.6
Aqoxy5G04351 Aquilegia oxysepala HOM05D000733 ORTHO05D000644 1.6e-08 63.2 63 49.2
MBI04_g27242_MAGBIO Magnolia biondii HOM05D000733 ORTHO05D000644 1.6e-08 63.2 57 50.9
Nitab4.5_0004249g0010 Nicotiana tabacum HOM05D000733 ORTHO05D000644 1.6e-08 63.2 70 48.6
SalBow5G1644 Salvia bowleyana HOM05D000733 ORTHO05D000644 1.6e-08 63.2 55 54.5
SalBow5G1894 Salvia bowleyana HOM05D000733 ORTHO05D000644 1.6e-08 63.2 55 54.5
Sp6g01360 Schrenkiella parvula HOM05D000733 ORTHO05D000644 2.1e-08 62.8 69 47.8
TWI14G0451 Tripterygium wilfordii HOM05D000733 ORTHO05D000644 2.1e-08 62.8 55 54.5
arahy.Tifrunner.gnm1.ann1.PEG0RN Arachis hypogaea HOM05D001073 ORTHO05D002392 3.6e-08 62.0 56 55.4
AL6G51990 Arabidopsis lyrata HOM05D000733 ORTHO05D000644 4.7e-08 61.6 69 46.4
PSO478G3050 Papaver somniferum HOM05D000733 ORTHO05D000644 4.7e-08 61.6 57 57.9
PSO782G0836 Papaver somniferum HOM05D000733 ORTHO05D000644 4.7e-08 61.6 57 57.9
THA.LOC104827358 Tarenaya hassleriana HOM05D000733 ORTHO05D000644 4.7e-08 61.6 63 47.6
TAR629G1326 Trochodendron aralioides HOM05D000733 ORTHO05D000644 4.7e-08 61.6 57 52.6
AT4G01410 Arabidopsis thaliana HOM05D000733 ORTHO05D000644 6.1e-08 61.2 69 46.4
CSS0000525 Camellia sinensis var. sinensis HOM05D000733 ORTHO05D000644 8.0e-08 60.8 64 51.6
Thhalv10029297m.g Eutrema salsugineum HOM05D000733 ORTHO05D000644 8.0e-08 60.8 69 46.4
Carub.0006s3578 Capsella rubella HOM05D000733 ORTHO05D000644 1.0e-07 60.5 69 46.4
TWI23G0072 Tripterygium wilfordii HOM05D000733 ORTHO05D000644 1.4e-07 60.1 56 53.6
Manes.01G239400 Manihot esculenta HOM05D000733 ORTHO05D000644 3.0e-07 58.9 56 48.2
TAR374G0623 Trochodendron aralioides HOM05D003051 ORTHO05D003932 3.0e-07 58.9 56 53.6
Aa31LG5G1180 Aethionema arabicum HOM05D000733 ORTHO05D000644 4.0e-07 58.5 69 43.5
AL3G52370 Arabidopsis lyrata HOM05D000733 ORTHO05D000644 4.0e-07 58.5 63 49.2
A03p31620 Brassica napus HOM05D000733 ORTHO05D000644 4.0e-07 58.5 61 45.9
BcaC01g06821 Brassica carinata HOM05D000733 ORTHO05D000644 5.2e-07 58.2 61 45.9
C03p38620 Brassica napus HOM05D000733 ORTHO05D000644 5.2e-07 58.2 61 45.9
BolC3t16135H Brassica oleracea HOM05D000733 ORTHO05D000644 5.2e-07 58.2 61 45.9
Sabra02G0134100 Salix brachista HOM05D000733 ORTHO05D000644 6.8e-07 57.8 56 50.0
ATR0661G276 Amborella trichopoda HOM05D000733 ORTHO05D000644 8.9e-07 57.4 55 52.7
Gohir.A12G116900 Gossypium hirsutum HOM05D000733 ORTHO05D000644 8.9e-07 57.4 56 48.2
Gohir.D11G105800 Gossypium hirsutum HOM05D000733 ORTHO05D000644 8.9e-07 57.4 63 50.8
Gorai.007G113100 Gossypium raimondii HOM05D000733 ORTHO05D000644 8.9e-07 57.4 63 50.8
Manes.05G016100 Manihot esculenta HOM05D000733 ORTHO05D000644 8.9e-07 57.4 56 48.2
RcHm_v2.0_Chr1g0361161 Rosa chinensis HOM05D000733 ORTHO05D000644 8.9e-07 57.4 58 51.7
BraA03t12338Z Brassica rapa HOM05D000733 ORTHO05D000644 1.2e-06 57.0 61 44.3
Ciclev10022290m.g Citrus clementina HOM05D000733 ORTHO05D000644 1.2e-06 57.0 58 51.7
CARHR250270 Cardamine hirsuta HOM05D000733 ORTHO05D000644 1.5e-06 56.6 63 44.4
Duzib138G0210 Durio zibethinus HOM05D000733 ORTHO05D000644 1.5e-06 56.6 56 50.0
FAN03G1036 Fragaria x ananassa HOM05D000733 ORTHO05D000644 1.5e-06 56.6 58 51.7
FAN10G0823 Fragaria x ananassa HOM05D000733 ORTHO05D000644 1.5e-06 56.6 58 51.7
FAN10G3093 Fragaria x ananassa HOM05D000733 ORTHO05D000644 1.5e-06 56.6 58 51.7
Gohir.D12G120460 Gossypium hirsutum HOM05D000733 ORTHO05D000644 1.5e-06 56.6 56 48.2
Gorai.008G131300 Gossypium raimondii HOM05D000733 ORTHO05D000644 1.5e-06 56.6 56 48.2
unitig_22.g6821 Utricularia gibba HOM05D000733 ORTHO05D000644 1.5e-06 56.6 63 46.0
Duzib133G0768 Durio zibethinus HOM05D000733 ORTHO05D000644 2.0e-06 56.2 57 49.1
FvH4_7g17770 Fragaria vesca HOM05D000733 ORTHO05D000644 2.0e-06 56.2 58 50.0
FAN06G4789 Fragaria x ananassa HOM05D000733 ORTHO05D000644 2.0e-06 56.2 58 50.0
Hma1.2p1_2492F.1_g323250 Hydrangea macrophylla HOM05D000733 ORTHO05D000644 2.0e-06 56.2 57 50.9
Thecc.01G333000 Theobroma cacao HOM05D000733 ORTHO05D000644 2.0e-06 56.2 56 48.2
Actinidia28082 Actinidia chinensis HOM05D001632 ORTHO05D001534 2.6e-06 55.8 49 55.1
FAN06G0579 Fragaria x ananassa HOM05D000733 ORTHO05D000644 2.6e-06 55.8 58 50.0
Nn1g00451 Nelumbo nucifera HOM05D000733 ORTHO05D000644 3.4e-06 55.5 56 46.4
BcaC04g24096 Brassica carinata HOM05D000733 ORTHO05D000644 5.7e-06 54.7 61 45.9
A09p01010 Brassica napus HOM05D000733 ORTHO05D000644 5.7e-06 54.7 61 45.9
C09p01100 Brassica napus HOM05D000733 ORTHO05D000644 5.7e-06 54.7 61 45.9
BraA09t35772Z Brassica rapa HOM05D000733 ORTHO05D000644 5.7e-06 54.7 61 45.9
BolC9t53043H Brassica oleracea HOM05D000733 ORTHO05D000644 7.5e-06 54.3 61 45.9
DCAR_022306 Daucus carota HOM05D000733 ORTHO05D000644 7.5e-06 54.3 68 41.2
Gohir.A11G101200 Gossypium hirsutum HOM05D000733 ORTHO05D000644 9.8e-06 53.9 63 49.2


User provided reference genes

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