Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G172100 Glycine max HOM05D027337 ORTHO05D000863 2.0e-98 362.5 182 100.0
Glyma.12G160600 Glycine max HOM05D027337 ORTHO05D000863 1.7e-97 359.4 182 99.5
Glyma.15G156000 Glycine max HOM05D027337 ORTHO05D000863 2.2e-97 359.0 182 98.9
Glyma.07G164400 Glycine max HOM05D027337 ORTHO05D000863 4.8e-97 357.8 182 98.9
Glyma.11G065900 Glycine max HOM05D000808 ORTHO05D000863 3.3e-90 335.1 170 97.6
VMungo1215G0633 Vigna mungo HOM05D000808 ORTHO05D000863 2.1e-60 236.1 187 71.1
Phvul.002G028000 Phaseolus vulgaris HOM05D000808 ORTHO05D000863 3.6e-60 235.3 188 69.7
arahy.Tifrunner.gnm1.ann1.5G68FD Arachis hypogaea HOM05D000808 ORTHO05D000863 4.6e-39 165.2 178 57.3
arahy.Tifrunner.gnm1.ann1.2J0DRT Arachis hypogaea HOM05D000808 ORTHO05D000863 3.9e-38 162.2 178 56.7
Psat2g161080 Pisum sativum HOM05D000808 ORTHO05D000863 2.4e-32 142.9 185 46.5
Medtr5g019790 Medicago truncatula HOM05D000808 ORTHO05D000863 4.1e-32 142.1 181 50.3
Lalb_Chr09g0322561 Lupinus albus HOM05D000808 ORTHO05D000863 9.2e-32 141.0 171 54.4
TPR.G18821 Trifolium pratense HOM05D000808 ORTHO05D000863 2.0e-26 123.2 175 45.1
Glyma.01G177132 Glycine max HOM05D000808 ORTHO05D000863 1.1e-21 107.5 57 89.5
Lj2g0024610 Lotus japonicus HOM05D000808 ORTHO05D000863 8.1e-20 101.3 154 50.0
QL06p045409 Quercus lobata HOM05D000808 ORTHO05D000863 2.4e-19 99.8 191 41.9
CANSAT01G1292 Cannabis sativa HOM05D000808 ORTHO05D000863 2.3e-14 83.2 177 32.2
Prupe.7G151100 Prunus persica HOM05D000808 ORTHO05D000863 8.7e-14 81.3 152 39.5
TAR381G0441 Trochodendron aralioides HOM05D000808 ORTHO05D000863 8.1e-12 74.7 126 39.7
Ca_00391_v3 Cicer arietinum L. HOM05D000808 ORTHO05D000863 3.1e-11 72.8 114 43.9
Dinv39961 Davidia involucrata HOM05D000808 ORTHO05D000863 2.0e-10 70.1 127 34.6
Potri.005G125700 Populus trichocarpa HOM05D000808 ORTHO05D000863 3.4e-10 69.3 150 34.7
RcHm_v2.0_Chr2g0102131 Rosa chinensis HOM05D000808 ORTHO05D000863 3.4e-10 69.3 162 36.4
Eucgr.H01259 Eucalyptus grandis HOM05D000808 ORTHO05D000863 9.9e-10 67.8 166 33.1
Sabra05G0103300 Salix brachista HOM05D000808 ORTHO05D000863 1.7e-09 67.0 151 35.1
COL.COLO4_22114 Corchorus olitorius HOM05D000808 ORTHO05D000863 2.9e-09 66.2 117 37.6
MD02G1151900 Malus domestica HOM05D000808 ORTHO05D000863 3.8e-09 65.9 158 34.8
CSS0005718 Camellia sinensis var. sinensis HOM05D000808 ORTHO05D000863 4.9e-09 65.5 118 34.7
Hma1.2p1_0905F.1_g235330 Hydrangea macrophylla HOM05D000808 ORTHO05D000863 4.9e-09 65.5 159 32.1
Manes.12G089902 Manihot esculenta HOM05D000808 ORTHO05D000863 1.1e-08 64.3 118 35.6
Thecc.01G039400 Theobroma cacao HOM05D000808 ORTHO05D000863 1.9e-08 63.5 190 31.1
GSVIVG01019004001 Vitis vinifera HOM05D000808 ORTHO05D000863 3.2e-08 62.8 79 46.8
Nn1g05076 Nelumbo nucifera HOM05D000808 ORTHO05D000863 1.2e-07 60.8 127 36.2
PGR102G2979 Punica granatum HOM05D000808 ORTHO05D000863 2.1e-07 60.1 179 31.3
TWI53G1506 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 2.1e-07 60.1 172 33.1
TWI09G0154 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 6.0e-07 58.5 165 33.9
Ciclev10025600m.g Citrus clementina HOM05D000808 ORTHO05D000863 1.3e-06 57.4 182 29.1
VMungo0251G2369 Vigna mungo HOM05D000808 ORTHO05D000863 3.0e-06 56.2 116 40.5
Duzib147G1697 Durio zibethinus HOM05D000808 ORTHO05D000863 3.9e-06 55.8 117 35.0
Rhsim08G0112900 Rhododendron simsii HOM05D000808 ORTHO05D000863 6.7e-06 55.1 128 36.7
Cpa.g.sc158.2 Carica papaya HOM05D000808 ORTHO05D000863 8.7e-06 54.7 119 32.8


User provided reference genes

Program Settings