Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 6.3e-70 267.3 135 100.0
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 1.4e-37 159.8 99 85.9
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 1.5e-26 123.2 101 71.3
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 2.6e-23 112.5 111 59.5
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 9.9e-23 110.5 100 62.0
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.3e-22 110.2 116 55.2
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.3e-22 110.2 97 64.9
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 1.9e-21 106.3 104 57.7
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 6.0e-20 101.3 110 51.8
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 1.3e-19 100.1 98 55.1
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.6e-17 93.2 110 49.1
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 4.6e-12 75.1 95 49.5
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 1.0e-11 73.9 120 42.5
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 1.3e-11 73.6 102 46.1
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 3.0e-11 72.4 98 44.9
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 8.7e-11 70.9 111 41.4
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 9.6e-10 67.4 95 42.1
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 2.8e-09 65.9 103 42.7
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 3.7e-09 65.5 86 43.0
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 4.8e-09 65.1 80 46.2
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.8e-08 63.2 114 41.2
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 2.4e-08 62.8 100 41.0
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 9.0e-08 60.8 86 43.0
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 1.2e-07 60.5 102 40.2
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.2e-07 60.5 84 47.6
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 3.4e-07 58.9 105 38.1
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 7.6e-07 57.8 95 38.9
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 7.6e-07 57.8 93 40.9
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 7.6e-07 57.8 85 42.4
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 7.6e-07 57.8 79 39.2
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.0e-06 57.4 56 51.8
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.0e-06 57.4 64 53.1
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 2.2e-06 56.2 54 53.7
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.2e-06 56.2 61 49.2
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.9e-06 55.8 83 41.0
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 3.8e-06 55.5 90 41.1
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 3.8e-06 55.5 56 51.8
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 4.9e-06 55.1 117 36.8
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 6.5e-06 54.7 72 47.2
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 6.5e-06 54.7 66 48.5


User provided reference genes

Program Settings