Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 0.0e+00 1088.2 570 100.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.0e-262 908.3 525 91.8
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 1.0e-246 856.7 536 84.1
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 2.1e-239 832.4 524 84.2
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.3e-222 775.8 535 77.2
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.6e-191 673.3 531 69.3
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 2.3e-190 669.5 522 68.8
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 2.5e-184 649.4 580 63.3
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.2e-183 647.1 438 75.8
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 8.1e-183 644.4 455 72.7
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 6.4e-180 634.8 486 68.9
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 6.4e-180 634.8 532 66.0
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 9.2e-179 630.9 538 66.4
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 2.3e-177 626.3 478 66.3
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.2e-175 620.5 546 61.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 3.6e-175 619.0 509 65.4
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 4.7e-175 618.6 506 64.8
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 1.2e-173 614.0 539 61.8
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 9.9e-173 610.9 490 65.7
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 2.4e-171 606.3 501 65.1
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 9.2e-171 604.4 530 60.4
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.1e-170 603.2 537 61.1
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 2.1e-170 603.2 502 63.9
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 8.6e-169 597.8 497 64.0
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 8.6e-169 597.8 539 59.6
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 8.6e-169 597.8 492 64.4
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.1e-168 597.4 500 63.2
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.5e-168 597.0 534 60.9
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 1.5e-168 597.0 449 68.2
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 3.3e-168 595.9 493 63.1
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.1e-166 590.9 489 63.6
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.4e-166 590.5 566 56.5
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.4e-166 590.5 458 66.6
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.4e-166 590.5 458 66.6
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 3.1e-166 589.3 453 66.4
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.2e-165 587.4 493 63.3
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 2.9e-164 582.8 499 61.1
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 2.4e-163 579.7 519 62.8
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 3.5e-162 575.9 480 64.0
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.6e-162 575.5 491 62.5
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 7.8e-162 574.7 463 63.5
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.3e-161 573.9 491 62.5
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.1e-160 570.9 434 67.3
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 7.3e-160 568.2 488 61.5
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.3e-159 567.4 455 64.0
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.1e-159 566.6 522 59.0
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 3.6e-159 565.8 458 64.6
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.9e-155 553.5 480 60.2
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 5.4e-155 552.0 486 59.5
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 7.1e-155 551.6 455 62.9
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 7.9e-154 548.1 478 58.6
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.0e-153 547.7 524 57.1
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 3.3e-152 542.7 475 58.5
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.3e-152 542.7 457 59.3
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.6e-152 541.2 543 57.1
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.6e-151 540.4 492 59.3
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 4.5e-149 532.3 440 64.3
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 4.5e-149 532.3 511 56.0
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 5.8e-149 531.9 498 57.8
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.7e-148 530.4 449 63.5
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 3.8e-148 529.3 451 61.0
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.8e-148 529.3 484 56.0
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 8.4e-148 528.1 463 59.8
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.4e-147 526.6 499 58.1
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 7.1e-147 525.0 463 59.6
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 7.9e-146 521.5 405 65.9
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.3e-145 520.8 440 60.5
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.8e-145 520.4 463 59.2
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 3.0e-145 519.6 522 55.4
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 2.5e-144 516.5 476 58.0
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 3.3e-144 516.2 478 57.7
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 3.3e-144 516.2 457 60.0
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 3.3e-144 516.2 440 60.5
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 9.6e-144 514.6 463 58.1
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 3.7e-143 512.7 476 57.8
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.1e-142 511.1 543 55.4
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.4e-142 510.0 510 54.7
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 1.2e-141 507.7 515 53.8
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 1.5e-141 507.3 495 54.9
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.5e-141 507.3 495 54.9
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 3.4e-141 506.1 517 53.4
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 4.5e-141 505.8 480 57.3
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.3e-140 504.2 452 57.5
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 4.9e-140 502.3 514 53.1
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 1.4e-139 500.7 443 59.6
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.0e-137 493.0 484 55.4
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.9e-136 490.3 472 57.0
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 3.7e-135 486.1 461 57.3
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 6.3e-135 485.3 497 51.9
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 6.9e-134 481.9 454 57.0
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 2.2e-132 476.9 525 52.0
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 4.6e-130 469.2 486 52.5
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 8.7e-129 464.9 478 52.9
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 5.5e-123 445.7 448 52.7
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.4e-121 441.0 270 82.2
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 6.1e-114 415.6 513 48.3
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.1e-102 376.7 531 43.9
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 3.1e-86 323.6 272 62.5
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 3.5e-77 293.5 370 43.0
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 7.3e-75 285.8 218 65.6
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 4.7e-74 283.1 420 39.3
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 2.3e-73 280.8 277 56.7
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.6e-69 266.5 267 55.8
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 6.6e-68 262.7 201 65.7
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 2.5e-67 260.8 238 58.4
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.3e-60 238.4 278 52.9
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.3e-60 238.4 211 58.3
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 3.1e-57 227.3 176 63.1
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.2e-56 225.3 270 48.1
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.4e-38 164.5 301 33.9
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 2.6e-32 144.4 247 35.2
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 2.7e-29 134.4 146 52.7
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.4e-25 121.3 109 59.6
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 5.5e-22 110.2 108 55.6
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 5.3e-17 93.6 129 42.6
ECA240G1335 Erigeron canadensis HOM05D001865 ORTHO05D001815 4.2e-06 57.4 224 28.6


User provided reference genes

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