Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G160050 Glycine max HOM05D019558 ORTHO05D029759 6.0e-183 644.0 324 100.0
Glyma.07G163500 Glycine max HOM05D019558 ORTHO05D029759 1.2e-63 247.7 162 79.0
Glyma.07G160300 Glycine max HOM05D019558 ORTHO05D029759 1.3e-41 174.5 161 58.4
Glyma.20G008500 Glycine max HOM05D019558 ORTHO05D029759 6.5e-20 102.4 73 71.2
Dinv13278 Davidia involucrata HOM05D000097 ORTHO05D000041 5.1e-09 66.2 286 21.7
Ca_02878_v3 Cicer arietinum L. HOM05D008404 ORTHO05D000001 1.1e-08 65.1 97 32.0
Lalb_Chr17g0338181 Lupinus albus HOM05D011181 ORTHO05D011525 1.5e-08 64.7 68 47.1
Glyma.20G007700 Glycine max HOM05D011181 ORTHO05D011525 2.0e-08 64.3 63 54.0
VMungo1309G0115 Vigna mungo HOM05D008404 ORTHO05D000001 4.4e-08 63.2 126 30.2
CANSAT25G2785 Cannabis sativa HOM05D000002 ORTHO05D000001 5.7e-08 62.8 97 34.0
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 7.4e-08 62.4 118 28.8
Atru.chr5.2499 Acer truncatum HOM05D019558 ORTHO05D000001 1.1e-06 58.5 98 32.7
CANSAT11G0488 Cannabis sativa HOM05D000003 ORTHO05D000126 1.1e-06 58.5 103 27.2
Psat5g034040 Pisum sativum HOM05D008404 ORTHO05D000001 1.1e-06 58.5 119 29.4
Sopen03g005010 Solanum pennellii HOM05D000002 ORTHO05D000047 1.1e-06 58.5 272 23.5
TPR.G665 Trifolium pratense HOM05D000002 ORTHO05D000001 1.1e-06 58.5 100 32.0
TPR.G32556 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-06 58.2 100 32.0
Ca_12491_v3 Cicer arietinum L. HOM05D011181 ORTHO05D011525 1.8e-06 57.8 62 46.8
Lalb_Chr01g0011111 Lupinus albus HOM05D000002 ORTHO05D000001 1.8e-06 57.8 93 33.3
VMungo1215G3207 Vigna mungo HOM05D011181 ORTHO05D011525 1.8e-06 57.8 63 47.6
Medtr2g045630 Medicago truncatula HOM05D011181 ORTHO05D011525 5.3e-06 56.2 62 46.8
Psat6g120880 Pisum sativum HOM05D000002 ORTHO05D000001 5.3e-06 56.2 116 28.4
Psat6g097640 Pisum sativum HOM05D011181 ORTHO05D011525 7.0e-06 55.8 66 43.9
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 7.0e-06 55.8 96 31.2
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.1e-06 55.5 188 26.1


User provided reference genes

Program Settings