Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 7.3e-74 280.4 137 100.0
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 7.1e-53 210.7 112 93.8
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.5e-50 202.2 136 75.7
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 2.8e-49 198.7 112 86.6
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 8.2e-49 197.2 112 85.7
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 2.6e-47 192.2 112 83.0
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 2.9e-46 188.7 112 82.1
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 3.8e-46 188.3 112 80.4
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 8.5e-46 187.2 112 82.1
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 8.5e-46 187.2 112 82.1
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 2.3e-43 179.1 112 78.6
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 1.2e-39 166.8 112 72.3
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.5e-39 166.4 112 71.4
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 1.5e-39 166.4 113 74.3
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.3e-38 163.3 112 68.8
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 3.8e-38 161.8 112 67.9
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.8e-38 161.8 112 69.6
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 5.0e-38 161.4 114 65.8
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 8.5e-38 160.6 112 71.4
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.1e-37 160.2 112 68.8
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.4e-37 159.8 112 67.9
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.9e-37 159.5 112 70.5
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 2.5e-37 159.1 112 68.8
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 3.2e-37 158.7 112 67.0
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.2e-37 158.3 112 68.8
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 4.2e-37 158.3 112 68.8
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 4.2e-37 158.3 111 68.5
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 7.2e-37 157.5 112 67.9
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.2e-37 157.5 112 67.9
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 7.2e-37 157.5 111 69.4
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 9.4e-37 157.1 112 67.0
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 9.4e-37 157.1 112 69.6
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 1.2e-36 156.8 112 66.1
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.2e-36 156.8 112 67.9
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-36 156.8 112 68.8
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-36 156.8 112 67.9
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-36 156.8 112 67.9
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.6e-36 156.4 112 67.9
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.6e-36 156.4 112 68.8
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.6e-36 156.4 112 67.9
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.6e-36 156.4 112 68.8
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 2.7e-36 155.6 111 71.2
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 4.7e-36 154.8 112 66.1
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 4.7e-36 154.8 112 67.9
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.0e-35 153.7 112 68.8
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.0e-35 153.7 112 67.0
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.9e-35 151.8 113 67.3
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 3.9e-35 151.8 112 67.9
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.1e-34 150.2 112 65.2
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.1e-34 150.2 112 65.2
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 1.5e-34 149.8 112 66.1
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 5.7e-34 147.9 112 61.6
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 2.8e-33 145.6 112 66.1
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.4e-32 143.3 112 61.6
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.4e-32 143.3 112 62.5
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 3.1e-32 142.1 112 60.7
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 3.1e-32 142.1 112 63.4
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 9.1e-32 140.6 112 58.9
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 9.1e-32 140.6 112 59.8
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.0e-31 139.4 112 60.7
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 2.6e-31 139.0 112 63.4
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 2.6e-31 139.0 112 62.5
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 3.5e-31 138.7 112 63.4
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 3.5e-31 138.7 112 63.4
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 4.5e-31 138.3 111 58.6
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 5.9e-31 137.9 112 63.4
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 5.9e-31 137.9 112 63.4
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 5.9e-31 137.9 111 56.8
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 7.7e-31 137.5 112 63.4
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.0e-30 137.1 112 58.0
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.0e-30 137.1 112 62.5
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 1.0e-30 137.1 112 62.5
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.3e-30 136.7 112 62.5
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.7e-30 136.3 112 58.9
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 2.2e-30 136.0 112 61.6
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 2.2e-30 136.0 111 59.5
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 2.9e-30 135.6 112 60.7
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 2.9e-30 135.6 112 60.7
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 3.8e-30 135.2 112 57.1
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 5.0e-30 134.8 112 61.6
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.4e-29 133.3 112 59.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.4e-29 133.3 112 59.8
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.4e-29 133.3 112 59.8
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.9e-29 132.9 112 60.7
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.9e-29 132.9 113 58.4
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.9e-29 132.9 112 58.9
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.5e-29 132.5 112 59.8
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.5e-29 132.5 134 52.2
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 2.5e-29 132.5 111 58.6
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 2.5e-29 132.5 113 58.4
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 5.5e-29 131.3 115 59.1
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 7.2e-29 131.0 112 58.0
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 7.2e-29 131.0 112 59.8
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.6e-28 129.8 112 58.9
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.1e-28 129.4 112 56.2
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 8.0e-28 127.5 112 56.2
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 3.0e-27 125.6 112 59.8
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 3.0e-27 125.6 112 59.8
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.1e-26 123.6 112 54.5
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 2.2e-25 119.4 112 53.6
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 2.8e-25 119.0 118 55.9
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.1e-24 117.1 80 68.8
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 2.6e-23 112.5 110 49.1
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 2.2e-22 109.4 63 79.4
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.9e-21 106.3 112 51.8
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.6e-20 103.2 90 56.7
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.7e-20 102.4 62 74.2
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.8e-19 99.8 112 49.1
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 7.0e-16 87.8 110 35.5
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.3e-14 83.6 98 34.7
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 1.7e-14 83.2 116 40.5
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 5.5e-13 78.2 97 38.1


User provided reference genes

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