Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 9.9e-104 380.2 200 100.0
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 2.3e-84 315.8 198 86.9
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 9.4e-78 293.9 200 75.0
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 4.4e-75 285.0 198 73.2
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 5.2e-68 261.5 201 72.6
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 5.0e-63 245.0 198 64.6
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 6.1e-61 238.0 201 66.7
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 3.0e-60 235.7 197 68.5
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 3.7e-58 228.8 203 65.5
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 2.1e-45 186.4 198 56.6
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 1.5e-43 180.3 201 55.2
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 2.4e-41 172.9 199 54.3
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 3.5e-40 169.1 200 53.5
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 4.5e-40 168.7 193 52.8
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 4.5e-40 168.7 180 54.4
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 6.6e-39 164.9 197 55.3
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 2.1e-37 159.8 200 51.5
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 2.1e-37 159.8 204 55.9
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 4.7e-37 158.7 211 51.2
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 6.1e-37 158.3 177 53.7
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 1.8e-36 156.8 180 52.2
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 3.0e-36 156.0 177 53.1
Potri.006G098800 Populus trichocarpa HOM05D008730 ORTHO05D010922 5.2e-36 155.2 200 47.5
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 1.5e-35 153.7 200 51.0
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 2.0e-35 153.3 198 48.0
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 3.4e-35 152.5 199 50.3
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 3.4e-35 152.5 199 50.3
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.2e-34 149.8 273 36.6
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 2.9e-34 149.4 199 48.2
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.9e-34 149.4 135 54.8
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 1.1e-33 147.5 198 49.5
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 7.0e-33 144.8 198 48.5
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 2.0e-32 143.3 205 52.7
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 1.1e-30 137.5 202 46.5
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 2.5e-30 136.3 198 48.0
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 6.6e-23 111.7 132 52.3
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 8.6e-23 111.3 139 51.8
ATR0618G247 Amborella trichopoda HOM05D008730 ORTHO05D010922 5.6e-22 108.6 226 39.8
Lsat_1_v5_gn_9_33720 Lactuca sativa HOM05D008730 ORTHO05D010922 3.1e-20 102.8 177 46.3
Migut.J00187 Erythranthe guttata HOM05D008730 ORTHO05D010922 1.5e-19 100.5 154 43.5
Cpa.g.sc163.12 Carica papaya HOM05D008730 ORTHO05D010922 3.7e-18 95.9 170 41.2
MD04G1149700 Malus domestica HOM05D008730 ORTHO05D010922 1.3e-15 87.4 106 58.5
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 1.5e-14 84.0 96 46.9


User provided reference genes

Program Settings