Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 1.1e-41 172.9 88 100.0
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 2.9e-39 164.9 86 95.3
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 9.3e-38 159.8 86 91.9
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 5.8e-32 140.6 87 82.8
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 2.5e-30 135.2 87 77.0
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 3.2e-30 134.8 86 75.6
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 4.2e-30 134.4 87 77.0
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 5.5e-30 134.0 90 73.3
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 6.7e-28 127.1 87 74.7
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 1.5e-27 125.9 87 72.4
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 1.9e-27 125.6 86 69.8
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 1.9e-27 125.6 86 69.8
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 1.9e-27 125.6 87 73.6
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 2.5e-27 125.2 86 70.9
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 1.6e-26 122.5 87 70.1
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 1.6e-26 122.5 87 70.1
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 1.6e-26 122.5 87 72.4
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 2.8e-26 121.7 87 70.1
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 4.8e-26 120.9 90 70.0
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 1.1e-25 119.8 87 70.1
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 1.4e-25 119.4 87 67.8
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 1.8e-25 119.0 88 67.0
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 5.3e-25 117.5 87 67.8
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 5.3e-25 117.5 88 68.2
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 9.0e-25 116.7 87 66.7
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 1.5e-24 115.9 87 69.0
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 2.0e-24 115.5 87 65.5
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 2.6e-24 115.2 89 69.7
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 3.4e-24 114.8 88 65.9
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.0e-23 113.2 87 65.5
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.0e-23 113.2 87 65.5
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 1.0e-23 113.2 61 91.8
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 1.7e-23 112.5 86 65.1
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 1.7e-23 112.5 88 65.9
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.7e-23 112.5 88 65.9
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 2.2e-23 112.1 87 65.5
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 2.9e-23 111.7 87 64.4
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 2.9e-23 111.7 87 66.7
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 3.8e-23 111.3 89 66.3
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 6.5e-23 110.5 87 69.0
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 8.4e-23 110.2 89 65.2
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 8.4e-23 110.2 86 68.6
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 8.4e-23 110.2 89 59.6
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.1e-22 109.8 86 66.3
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 1.1e-22 109.8 88 67.0
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 1.4e-22 109.4 89 64.0
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 1.4e-22 109.4 86 66.3
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.9e-22 109.0 88 64.8
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 1.9e-22 109.0 87 65.5
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 1.9e-22 109.0 90 65.6
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 2.5e-22 108.6 86 65.1
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 3.2e-22 108.2 89 65.2
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 4.2e-22 107.8 88 62.5
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 5.5e-22 107.5 88 62.5
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 7.1e-22 107.1 87 64.4
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 9.3e-22 106.7 87 64.4
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 9.3e-22 106.7 89 64.0
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 9.3e-22 106.7 88 61.4
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 1.2e-21 106.3 90 65.6
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 1.2e-21 106.3 87 63.2
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 1.6e-21 105.9 89 64.0
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 1.6e-21 105.9 89 62.9
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 2.1e-21 105.5 89 62.9
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 2.1e-21 105.5 87 60.9
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 2.7e-21 105.1 87 63.2
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 2.7e-21 105.1 88 64.8
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 2.7e-21 105.1 88 63.6
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 3.5e-21 104.8 87 62.1
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 4.6e-21 104.4 89 60.7
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 4.6e-21 104.4 89 64.0
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 4.6e-21 104.4 88 60.2
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 7.9e-21 103.6 87 59.8
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.0e-20 103.2 89 65.2
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.3e-20 102.8 88 62.5
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 1.3e-20 102.8 89 61.8
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 1.3e-20 102.8 86 64.0
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 1.3e-20 102.8 86 64.0
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 1.8e-20 102.4 88 62.5
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 2.3e-20 102.1 88 61.4
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 2.3e-20 102.1 87 62.1
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 2.3e-20 102.1 90 63.3
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 2.3e-20 102.1 90 63.3
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 2.3e-20 102.1 85 58.8
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 3.9e-20 101.3 88 59.1
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 3.9e-20 101.3 88 59.1
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 3.9e-20 101.3 86 61.6
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 5.1e-20 100.9 58 81.0
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 6.7e-20 100.5 88 60.2
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 8.7e-20 100.1 88 59.1
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 1.1e-19 99.8 87 59.8
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 1.1e-19 99.8 87 59.8
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 1.1e-19 99.8 87 59.8
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 1.1e-19 99.8 87 59.8
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 1.1e-19 99.8 87 59.8
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 1.5e-19 99.4 89 64.0
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 1.5e-19 99.4 88 61.4
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 2.5e-19 98.6 91 59.3
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 2.5e-19 98.6 88 59.1
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 2.5e-19 98.6 88 59.1
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 3.3e-19 98.2 89 59.6
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 4.3e-19 97.8 87 57.5
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 5.7e-19 97.4 92 58.7
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 7.4e-19 97.1 89 59.6
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 9.7e-19 96.7 88 58.0
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 9.7e-19 96.7 87 57.5
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 1.6e-18 95.9 92 59.8
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 1.6e-18 95.9 87 56.3
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 2.8e-18 95.1 90 62.2
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 2.8e-18 95.1 88 56.8
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 4.8e-18 94.4 87 56.3
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 4.8e-18 94.4 96 54.2
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 6.3e-18 94.0 87 56.3
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 1.4e-17 92.8 66 72.7
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 3.1e-17 91.7 94 50.0
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 5.3e-17 90.9 91 57.1
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 2.0e-16 89.0 65 69.2
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 2.0e-16 89.0 94 51.1
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 7.7e-16 87.0 91 53.8
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 2.2e-15 85.5 89 53.9
QL04p026254 Quercus lobata HOM05D005488 ORTHO05D006568 1.9e-14 82.4 69 65.2
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 2.1e-13 79.0 55 69.1
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 6.1e-13 77.4 80 53.8
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 5.1e-12 74.3 119 39.5
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 5.1e-12 74.3 57 61.4
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 1.1e-11 73.2 57 57.9
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 3.3e-11 71.6 53 66.0
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 5.7e-11 70.9 71 50.7
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 9.7e-11 70.1 41 80.5
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 1.7e-10 69.3 40 82.5
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 2.8e-10 68.6 39 82.1
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 3.7e-10 68.2 61 54.1
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 3.7e-10 68.2 40 82.5
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 3.1e-09 65.1 54 57.4
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 2.2e-07 58.9 40 65.0
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 5.0e-07 57.8 62 46.8


User provided reference genes

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