Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 2.2e-82 308.9 157 100.0
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 8.5e-50 200.7 160 70.0
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 5.9e-43 177.9 142 66.2
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 7.2e-41 171.0 142 62.0
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 1.6e-32 143.3 149 51.0
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 2.3e-31 139.4 140 54.3
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 5.2e-31 138.3 140 50.7
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.2e-30 137.1 148 46.6
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 1.5e-30 136.7 148 46.6
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 1.3e-29 133.7 135 51.1
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 1.7e-29 133.3 136 51.5
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 8.2e-29 131.0 140 46.4
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 5.3e-28 128.3 141 46.1
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 7.0e-28 127.9 140 46.4
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 2.0e-27 126.3 140 45.7
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 3.5e-27 125.6 140 46.4
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 4.5e-27 125.2 140 44.3
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 5.9e-27 124.8 141 46.1
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 7.7e-27 124.4 140 46.4
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 7.7e-27 124.4 140 45.0
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 7.7e-27 124.4 137 43.8
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 7.7e-27 124.4 146 43.8
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 1.0e-26 124.0 135 47.4
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 1.7e-26 123.2 140 45.0
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 2.9e-26 122.5 140 44.3
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 2.9e-26 122.5 140 45.0
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 2.9e-26 122.5 139 45.3
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 2.9e-26 122.5 140 45.0
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 3.8e-26 122.1 140 45.7
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 5.0e-26 121.7 140 45.0
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 1.5e-25 120.2 140 40.0
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 1.9e-25 119.8 140 45.7
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.5e-25 119.4 139 42.4
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 3.2e-25 119.0 139 44.6
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 4.2e-25 118.6 140 44.3
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 4.2e-25 118.6 140 41.4
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 4.2e-25 118.6 140 42.1
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 5.5e-25 118.2 141 44.7
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 7.2e-25 117.9 106 54.7
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 7.2e-25 117.9 140 41.4
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 9.4e-25 117.5 140 42.9
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 9.4e-25 117.5 143 43.4
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 9.4e-25 117.5 140 44.3
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 1.2e-24 117.1 108 52.8
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 1.6e-24 116.7 146 43.2
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 1.6e-24 116.7 143 46.2
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 2.1e-24 116.3 140 42.1
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 2.1e-24 116.3 140 42.1
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 2.7e-24 115.9 134 46.3
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 3.6e-24 115.5 143 42.7
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 3.6e-24 115.5 140 40.7
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 4.7e-24 115.2 140 44.3
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 6.1e-24 114.8 143 40.6
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 8.0e-24 114.4 143 42.0
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.0e-23 114.0 141 43.3
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 1.0e-23 114.0 151 43.7
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.4e-23 113.6 139 42.4
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.4e-23 113.6 140 40.7
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 1.4e-23 113.6 140 42.1
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 1.4e-23 113.6 145 42.1
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 3.0e-23 112.5 143 42.0
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 3.0e-23 112.5 143 42.0
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 3.0e-23 112.5 147 40.8
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 3.0e-23 112.5 143 40.6
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 3.0e-23 112.5 159 39.6
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 3.0e-23 112.5 141 42.6
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 4.0e-23 112.1 152 41.4
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 5.2e-23 111.7 146 43.2
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 8.8e-23 110.9 139 41.0
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.5e-22 110.2 131 45.0
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 1.5e-22 110.2 144 41.7
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 2.0e-22 109.8 128 44.5
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 5.7e-22 108.2 159 37.7
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 7.5e-22 107.8 144 41.7
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 9.8e-22 107.5 159 37.1
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 1.7e-21 106.7 155 38.1
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 1.7e-21 106.7 155 38.1
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 3.7e-21 105.5 145 38.6
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 1.4e-20 103.6 141 40.4
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 5.4e-20 101.7 126 39.7
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 7.0e-20 101.3 98 51.0
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 9.1e-20 100.9 149 36.9
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.6e-19 100.1 95 49.5
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 2.0e-19 99.8 158 37.3
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 2.0e-19 99.8 145 39.3
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 2.7e-19 99.4 147 40.1
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 5.9e-19 98.2 138 38.4
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 6.5e-18 94.7 138 34.8
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 8.6e-18 94.4 113 46.0
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 1.1e-17 94.0 138 39.9
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 1.5e-17 93.6 74 62.2
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 4.2e-17 92.0 69 65.2
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 1.2e-16 90.5 139 36.7
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 2.1e-16 89.7 141 36.2
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 2.1e-16 89.7 141 36.2
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 2.8e-16 89.4 112 41.1
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 1.8e-15 86.7 101 49.5
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 5.2e-15 85.1 99 44.4
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 6.8e-15 84.7 142 35.9
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 3.7e-13 79.0 79 46.8
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 3.7e-13 79.0 58 63.8
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 6.3e-13 78.2 85 44.7
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 9.2e-12 74.3 79 43.0
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 1.6e-11 73.6 147 29.9
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 2.7e-11 72.8 80 43.8
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 4.5e-11 72.0 100 37.0
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 4.5e-11 72.0 140 32.9
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 1.0e-10 70.9 67 53.7
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.0e-10 70.9 117 34.2
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 1.9e-09 66.6 56 53.6
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 3.3e-09 65.9 98 35.7
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 7.3e-09 64.7 132 30.3
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 1.6e-08 63.5 75 45.3
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 3.6e-08 62.4 121 32.2
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 4.7e-08 62.0 145 26.9
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 6.1e-08 61.6 144 27.8
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.3e-07 59.7 149 28.9
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 5.8e-06 55.1 111 31.5


User provided reference genes

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