Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 3.5e-28 127.9 64 100.0
Glyma.09G180700 Glycine max HOM05D008114 ORTHO05D010089 5.6e-26 120.6 64 92.2
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.5e-10 69.3 64 53.1
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 1.3e-09 66.2 64 53.1
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 8.1e-09 63.5 64 51.6
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 3.1e-08 61.6 64 51.6
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 3.1e-08 61.6 64 51.6
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.1e-08 61.6 64 53.1
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 4.0e-08 61.2 65 52.3
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 6.9e-08 60.5 65 52.3
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 6.9e-08 60.5 64 51.6
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 6.9e-08 60.5 64 51.6
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.2e-07 59.7 64 50.0
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.2e-07 59.7 64 51.6
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.0e-07 58.9 64 48.4
Nitab4.5_0000694g0130 Nicotiana tabacum HOM05D040682 ORTHO05D010089 3.4e-07 58.2 71 46.5
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.4e-07 58.2 67 49.3
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 5.8e-07 57.4 68 50.0
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 7.6e-07 57.0 48 58.3
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 7.6e-07 57.0 60 45.0
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 9.9e-07 56.6 65 46.2
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 9.9e-07 56.6 65 46.2
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 1.3e-06 56.2 64 46.9
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 2.2e-06 55.5 48 52.1
Solyc05g008880.1 Solanum lycopersicum HOM05D040682 ORTHO05D010089 2.2e-06 55.5 67 47.8
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 6.4e-06 53.9 72 44.4
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 8.4e-06 53.5 45 51.1


User provided reference genes

Program Settings