Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 1.3e-100 369.8 196 100.0
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 6.8e-73 277.7 203 79.3
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 1.3e-34 150.6 200 52.5
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 9.3e-30 134.4 190 51.1
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 7.7e-16 88.2 221 32.6
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 1.3e-15 87.4 213 34.3
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 3.6e-13 79.3 215 33.5
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 3.6e-13 79.3 205 31.2
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 1.1e-11 74.3 222 29.7
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 1.1e-11 74.3 222 32.4
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 5.7e-11 72.0 222 31.5
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 5.7e-11 72.0 204 29.9
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 7.4e-11 71.6 105 38.1
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 9.7e-11 71.2 105 39.0
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 1.7e-10 70.5 105 39.0
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.7e-10 70.5 105 39.0
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.7e-10 70.5 105 39.0
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.7e-10 70.5 105 39.0
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.7e-10 70.5 105 39.0
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.7e-10 70.5 105 39.0
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 3.7e-10 69.3 104 36.5
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 4.8e-10 68.9 104 37.5
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 6.3e-10 68.6 105 37.1
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 6.3e-10 68.6 105 38.1
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 8.2e-10 68.2 105 37.1
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 8.2e-10 68.2 105 37.1
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 8.2e-10 68.2 105 37.1
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 8.2e-10 68.2 105 37.1
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 1.1e-09 67.8 105 35.2
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 1.1e-09 67.8 105 35.2
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 1.1e-09 67.8 105 36.2
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 1.1e-09 67.8 105 39.0
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.4e-09 67.4 104 37.5
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.4e-09 67.4 198 28.8
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.4e-09 67.4 105 37.1
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 1.4e-09 67.4 105 38.1
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 1.8e-09 67.0 105 37.1
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 1.8e-09 67.0 107 35.5
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 1.8e-09 67.0 105 36.2
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 1.8e-09 67.0 197 27.9
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 2.4e-09 66.6 105 35.2
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 2.4e-09 66.6 145 33.8
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 2.4e-09 66.6 104 35.6
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 2.4e-09 66.6 105 35.2
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 3.1e-09 66.2 105 34.3
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 3.1e-09 66.2 130 33.8
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 3.1e-09 66.2 152 28.9
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 4.1e-09 65.9 105 36.2
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 4.1e-09 65.9 105 38.1
Glyma.09G185251 Glycine max HOM05D005829 ORTHO05D007246 5.3e-09 65.5 124 35.5
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 6.9e-09 65.1 105 34.3
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 6.9e-09 65.1 105 35.2
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 6.9e-09 65.1 105 35.2
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.2e-08 64.3 105 36.2
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.2e-08 64.3 195 27.7
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.5e-08 63.9 105 35.2
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 1.5e-08 63.9 105 34.3
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.5e-08 63.9 205 27.8
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 2.0e-08 63.5 162 28.4
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.0e-08 63.5 105 34.3
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 2.0e-08 63.5 105 37.1
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 2.0e-08 63.5 105 34.3
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.0e-08 63.5 104 35.6
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.0e-08 63.5 107 31.8
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.0e-08 63.5 107 31.8
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.6e-08 63.2 104 34.6
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 2.6e-08 63.2 193 26.4
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 3.4e-08 62.8 105 35.2
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 3.4e-08 62.8 105 35.2
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 5.9e-08 62.0 104 33.7
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.0e-07 61.2 105 34.3
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.0e-07 61.2 200 29.5
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.0e-07 61.2 130 30.0
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 1.3e-07 60.8 105 34.3
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.7e-07 60.5 105 34.3
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.7e-07 60.5 105 34.3
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 1.7e-07 60.5 203 26.1
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.7e-07 60.5 105 33.3
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 2.2e-07 60.1 105 32.4
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 2.9e-07 59.7 104 34.6
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 3.8e-07 59.3 104 32.7
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 3.8e-07 59.3 202 28.7
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 5.0e-07 58.9 189 27.0
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 6.5e-07 58.5 125 34.4
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 6.5e-07 58.5 196 26.5
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 8.5e-07 58.2 104 33.7
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 8.5e-07 58.2 105 32.4
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 1.4e-06 57.4 136 32.4
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 7.2e-06 55.1 125 33.6


User provided reference genes

Program Settings