Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G064400 Glycine max HOM05D000292 ORTHO05D000172 6.4e-73 277.3 142 100.0
Glyma.07G063000 Glycine max HOM05D000292 ORTHO05D000172 9.7e-37 157.1 122 72.1
Glyma.07G065400 Glycine max HOM05D000292 ORTHO05D000172 1.3e-36 156.8 122 72.1
Glyma.U031614 Glycine max HOM05D000292 ORTHO05D000172 2.8e-36 155.6 122 71.3
Glyma.18G226600 Glycine max HOM05D000292 ORTHO05D000172 2.5e-32 142.5 145 60.7
VMungo0331G0474 Vigna mungo HOM05D000292 ORTHO05D000172 2.8e-28 129.0 142 52.8
Phvul.008G111300 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.1e-27 127.1 142 57.0
Glyma.18G226400 Glycine max HOM05D000292 ORTHO05D000172 1.3e-25 120.2 144 55.6
VMungo0331G0326 Vigna mungo HOM05D000292 ORTHO05D030454 3.2e-24 115.5 122 55.7
VMungo0331G1742 Vigna mungo HOM05D000292 ORTHO05D030454 2.1e-23 112.8 132 52.3
Glyma.07G064900 Glycine max HOM05D000292 ORTHO05D000172 5.7e-21 104.8 76 75.0
Phvul.010G104400 Phaseolus vulgaris HOM05D000292 ORTHO05D030454 7.5e-21 104.4 125 49.6
Glyma.01G110100 Glycine max HOM05D000292 ORTHO05D000172 2.8e-20 102.4 113 55.8
VMungo0331G1917 Vigna mungo HOM05D000292 ORTHO05D000172 2.4e-19 99.4 113 54.0
TPR.G18390 Trifolium pratense HOM05D000292 ORTHO05D000172 1.6e-18 96.7 113 52.2
arahy.Tifrunner.gnm1.ann1.PF7WV9 Arachis hypogaea HOM05D000292 ORTHO05D000172 3.5e-18 95.5 110 52.7
Lj3g0006069 Lotus japonicus HOM05D000292 ORTHO05D000172 4.5e-18 95.1 113 55.8
Medtr4g019310 Medicago truncatula HOM05D000292 ORTHO05D000172 2.3e-17 92.8 111 50.5
Phvul.010G007500 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 2.3e-17 92.8 113 52.2
Psat7g242440 Pisum sativum HOM05D000292 ORTHO05D000172 3.3e-16 89.0 113 49.6
Ca_20095_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 2.8e-15 85.9 113 49.6
arahy.Tifrunner.gnm1.ann1.MAZ402 Arachis hypogaea HOM05D000292 ORTHO05D000172 6.8e-14 81.3 94 54.3
arahy.Tifrunner.gnm1.ann1.WI2C94 Arachis hypogaea HOM05D000292 ORTHO05D000172 2.0e-13 79.7 94 54.3
arahy.Tifrunner.gnm1.ann1.8PX07I Arachis hypogaea HOM05D000292 ORTHO05D000172 1.7e-12 76.6 99 51.5
VMungo0331G0193 Vigna mungo HOM05D000292 ORTHO05D030454 3.7e-12 75.5 81 53.1
Lj3g0027836 Lotus japonicus HOM05D000292 ORTHO05D000172 1.1e-11 73.9 97 51.5
arahy.Tifrunner.gnm1.ann1.X5IC73 Arachis hypogaea HOM05D000292 ORTHO05D000172 7.0e-11 71.2 99 48.5
Psat7g242240 Pisum sativum HOM05D000292 ORTHO05D000172 4.5e-10 68.6 96 49.0
Medtr4g019330 Medicago truncatula HOM05D000292 ORTHO05D000172 2.3e-09 66.2 103 47.6
arahy.Tifrunner.gnm1.ann1.0WKU4E Arachis hypogaea HOM05D003028 ORTHO05D003465 1.1e-08 63.9 103 44.7
arahy.Tifrunner.gnm1.ann1.LNF7XX Arachis hypogaea HOM05D000292 ORTHO05D000172 1.2e-07 60.5 102 42.2
arahy.Tifrunner.gnm1.ann1.Z9ZW6U Arachis hypogaea HOM05D000292 ORTHO05D000172 2.1e-07 59.7 102 39.2
Sopen09g006710 Solanum pennellii HOM05D000292 ORTHO05D000172 2.8e-07 59.3 110 42.7
arahy.Tifrunner.gnm1.ann1.L6Q662 Arachis hypogaea HOM05D000292 ORTHO05D000172 4.7e-07 58.5 102 40.2
BolC1t03264H Brassica oleracea HOM05D000292 ORTHO05D000172 4.7e-07 58.5 108 38.0
Peaxi162Scf00141g00027 Petunia axillaris HOM05D000292 ORTHO05D000172 4.7e-07 58.5 94 39.4
TPR.G14296 Trifolium pratense HOM05D000292 ORTHO05D000172 1.0e-06 57.4 93 41.9
Psat7g242200 Pisum sativum HOM05D000292 ORTHO05D000172 1.4e-06 57.0 106 40.6
TPR.G8199 Trifolium pratense HOM05D000292 ORTHO05D000172 1.4e-06 57.0 101 38.6
Lj3g0008222 Lotus japonicus HOM05D000292 ORTHO05D000172 1.8e-06 56.6 96 41.7
Oeu004611.5 Olea europaea HOM05D000292 ORTHO05D000172 1.8e-06 56.6 93 44.1
C01p33320 Brassica napus HOM05D000292 ORTHO05D000172 2.3e-06 56.2 108 37.0
LjContig00312_ERROPOS870357g0020002 Lotus japonicus HOM05D000292 ORTHO05D000172 2.3e-06 56.2 97 35.1
Nitab4.5_0021301g0010 Nicotiana tabacum HOM05D000292 ORTHO05D000172 3.0e-06 55.8 109 36.7
Peaxi162Scf01352g00021 Petunia axillaris HOM05D000292 ORTHO05D000172 3.0e-06 55.8 111 35.1
Peaxi162Scf01547g00007 Petunia axillaris HOM05D000292 ORTHO05D000172 3.0e-06 55.8 111 35.1
BcaC09g49752 Brassica carinata HOM05D000292 ORTHO05D000172 4.0e-06 55.5 108 37.0
C06p36280 Brassica napus HOM05D000292 ORTHO05D000172 4.0e-06 55.5 89 38.2
Aqoxy5G00483 Aquilegia oxysepala HOM05D000292 ORTHO05D000172 5.2e-06 55.1 82 34.1
A01p26210 Brassica napus HOM05D000292 ORTHO05D000172 5.2e-06 55.1 104 38.5
BraA01t02544Z Brassica rapa HOM05D000292 ORTHO05D000172 5.2e-06 55.1 104 38.5
PGSC0003DMG400020358 Solanum tuberosum HOM05D000292 ORTHO05D000172 6.8e-06 54.7 78 47.4


User provided reference genes

Program Settings