Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 1.7e-154 549.3 275 100.0
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 4.8e-125 451.4 277 84.5
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 5.2e-119 431.4 275 76.0
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 7.2e-113 411.0 278 74.1
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 3.6e-112 408.7 275 72.7
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 2.4e-108 396.0 285 68.8
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 2.0e-107 392.9 298 68.5
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 5.9e-107 391.3 281 71.2
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 2.5e-105 386.0 278 70.1
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 4.2e-105 385.2 277 69.7
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 6.1e-104 381.3 274 70.8
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 2.9e-101 372.5 275 68.0
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 4.1e-100 368.6 297 64.6
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 8.0e-96 354.4 229 74.7
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 3.1e-95 352.4 277 63.2
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 2.0e-94 349.7 276 63.0
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 2.9e-93 345.9 275 63.3
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 3.7e-93 345.5 272 62.1
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 5.4e-92 341.7 277 64.3
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 7.0e-92 341.3 276 63.0
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 7.0e-92 341.3 280 61.1
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 4.6e-91 338.6 228 73.7
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 4.6e-91 338.6 227 76.7
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 3.9e-90 335.5 277 59.9
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 6.6e-90 334.7 277 60.6
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 1.1e-89 334.0 282 62.1
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 1.5e-89 333.6 278 60.8
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 1.9e-89 333.2 275 62.9
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 5.6e-89 331.6 276 60.9
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 9.5e-89 330.9 280 60.0
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 4.7e-88 328.6 276 60.1
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.4e-87 327.0 271 61.6
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.1e-87 325.9 271 61.6
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 6.8e-87 324.7 283 59.4
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.2e-86 323.9 283 59.4
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 2.0e-86 323.2 279 60.2
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 2.6e-86 322.8 287 58.2
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 5.8e-86 321.6 276 59.4
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 5.8e-86 321.6 287 58.2
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 2.2e-85 319.7 280 57.9
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 2.2e-85 319.7 275 56.7
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 2.9e-85 319.3 285 57.9
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 2.9e-85 319.3 283 56.9
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 4.9e-85 318.5 278 58.6
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 4.9e-85 318.5 285 57.5
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 4.9e-85 318.5 279 59.5
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 1.4e-84 317.0 273 58.6
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 1.4e-84 317.0 273 56.4
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 4.1e-84 315.5 271 56.1
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 5.4e-84 315.1 276 59.4
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 7.1e-84 314.7 276 59.1
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 1.2e-83 313.9 278 57.9
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 1.6e-83 313.5 278 57.9
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 2.1e-83 313.2 273 57.9
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.5e-83 312.4 273 57.5
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 4.6e-83 312.0 282 58.5
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 6.0e-83 311.6 278 57.9
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 1.0e-82 310.8 266 60.5
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 3.0e-82 309.3 272 54.4
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 3.9e-82 308.9 278 57.6
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 1.1e-81 307.4 273 56.0
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 1.1e-81 307.4 273 56.0
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 1.9e-81 306.6 282 57.1
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 2.5e-81 306.2 275 54.2
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 4.3e-81 305.4 272 55.9
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 5.6e-81 305.1 273 54.6
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 7.3e-81 304.7 273 55.3
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 9.5e-81 304.3 279 57.0
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 1.2e-80 303.9 273 55.3
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 1.2e-80 303.9 274 56.6
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 1.6e-80 303.5 274 55.1
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 2.1e-80 303.1 278 56.5
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 2.8e-80 302.8 273 55.3
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 3.6e-80 302.4 273 55.3
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 6.2e-80 301.6 280 54.6
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 8.1e-80 301.2 273 54.6
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 8.1e-80 301.2 276 56.9
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 8.1e-80 301.2 274 55.5
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.1e-79 300.8 273 57.5
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 2.3e-79 299.7 273 54.2
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 3.1e-79 299.3 282 55.0
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 3.1e-79 299.3 273 53.8
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 3.1e-79 299.3 283 56.9
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 4.0e-79 298.9 273 53.5
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 6.8e-79 298.1 273 53.5
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 8.9e-79 297.7 273 53.8
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 8.9e-79 297.7 276 57.6
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 8.9e-79 297.7 274 56.9
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 1.5e-78 297.0 334 49.7
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 4.4e-78 295.4 274 53.6
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 9.9e-78 294.3 274 53.6
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 2.2e-77 293.1 289 54.0
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 4.9e-77 292.0 228 64.0
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 1.9e-76 290.0 186 75.3
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 2.4e-76 289.7 303 52.8
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 1.0e-74 284.3 231 62.8
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 3.0e-74 282.7 252 56.3
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 1.1e-73 280.8 210 67.1
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 1.1e-73 280.8 282 52.5
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 1.5e-73 280.4 208 66.8
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 3.3e-73 279.3 286 50.3
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 4.3e-73 278.9 215 65.1
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 5.6e-73 278.5 274 53.6
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 1.6e-72 276.9 233 59.7
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 2.8e-72 276.2 282 51.4
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 8.9e-71 271.2 269 49.4
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 2.0e-70 270.0 266 50.8
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 2.0e-70 270.0 273 51.6
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 3.8e-69 265.8 297 51.5
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 1.1e-68 264.2 194 68.0
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 7.1e-68 261.5 272 51.1
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 1.6e-67 260.4 184 64.1
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 1.6e-67 260.4 283 48.1
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 7.8e-67 258.1 215 58.6
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 3.0e-66 256.1 234 57.7
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 2.5e-65 253.1 273 46.9
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 5.6e-65 251.9 277 52.3
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 2.4e-63 246.5 216 57.9
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 7.1e-60 235.0 191 61.8
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.6e-59 233.8 227 52.4
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 7.9e-59 231.5 208 58.7
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 2.3e-58 229.9 210 56.2
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 3.3e-57 226.1 228 53.1
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.6e-51 207.2 162 63.0
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 1.5e-49 200.7 281 39.1
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 5.5e-44 182.2 244 38.9
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 4.3e-41 172.6 262 41.2
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 3.7e-40 169.5 262 40.8
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 2.0e-38 163.7 222 43.2
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.9e-36 157.1 113 67.3
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 9.3e-36 154.8 230 37.8
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.8e-34 150.6 96 76.0
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 3.0e-34 149.8 117 61.5
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 5.1e-34 149.1 96 74.0
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 3.3e-33 146.4 113 61.9
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 1.4e-31 141.0 270 33.7
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 2.0e-25 120.6 97 63.9
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 1.0e-21 108.2 71 71.8
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 5.0e-21 105.9 85 63.5
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.4e-20 104.4 85 57.6
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 1.8e-18 97.4 130 40.8
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 3.0e-18 96.7 121 42.1
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 9.7e-17 91.7 205 34.1
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 3.7e-16 89.7 193 29.5
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 9.4e-12 75.1 49 81.6
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 8.0e-11 72.0 135 37.8
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 1.4e-10 71.2 70 51.4
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 2.6e-09 67.0 44 70.5
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 2.6e-09 67.0 56 60.7
Cpa.g.sc25.204 Carica papaya HOM05D004903 ORTHO05D005849 2.8e-08 63.5 110 39.1
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 2.8e-08 63.5 187 26.7
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 3.1e-07 60.1 65 56.9
TPR.G14723 Trifolium pratense HOM05D004903 ORTHO05D005849 3.1e-07 60.1 41 73.2
Medtr8g023540 Medicago truncatula HOM05D004903 ORTHO05D005849 1.6e-06 57.8 62 53.2


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