Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 1.6e-65 252.7 131 100.0
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 2.3e-32 142.5 127 62.2
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 3.0e-32 142.1 127 61.4
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 1.5e-31 139.8 131 60.3
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 7.4e-31 137.5 131 59.5
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 6.9e-29 131.0 127 57.5
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 9.9e-28 127.1 127 58.3
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 8.7e-24 114.0 194 40.2
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 9.0e-21 104.0 100 60.0
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 1.4e-18 96.7 93 55.9
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 3.2e-18 95.5 104 51.0
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 5.5e-18 94.7 125 46.4
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 9.3e-18 94.0 116 46.6
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 2.7e-17 92.4 111 46.8
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 3.0e-16 89.0 117 47.0
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 3.9e-16 88.6 110 47.3
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 8.7e-16 87.4 120 44.2
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.1e-15 87.0 120 45.8
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.5e-15 86.7 114 47.4
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 1.5e-15 86.7 104 48.1
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 2.5e-15 85.9 127 41.7
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 3.3e-15 85.5 124 42.7
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 3.3e-15 85.5 120 45.0
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 3.3e-15 85.5 120 45.0
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 4.3e-15 85.1 129 41.9
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 4.3e-15 85.1 104 44.2
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 5.7e-15 84.7 108 47.2
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 9.6e-15 84.0 102 48.0
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 9.6e-15 84.0 107 45.8
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 1.3e-14 83.6 108 43.5
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 2.1e-14 82.8 109 45.9
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 4.8e-14 81.6 107 46.7
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 6.3e-14 81.3 111 45.9
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 1.1e-13 80.5 96 49.0
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 1.1e-13 80.5 108 45.4
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 4.1e-13 78.6 111 45.0
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 4.1e-13 78.6 129 39.5
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 5.3e-13 78.2 110 44.5
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 6.9e-13 77.8 123 43.9
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 6.9e-13 77.8 109 41.3
Glyma.05G095633 Glycine max HOM05D008167 ORTHO05D010296 1.5e-12 76.6 54 77.8
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 1.0e-11 73.9 95 44.2
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 2.9e-11 72.4 109 43.1
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 3.2e-10 68.9 107 37.4
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 7.2e-10 67.8 76 46.1
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.1e-09 66.2 114 37.7
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 2.7e-09 65.9 53 64.2
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 2.3e-08 62.8 72 51.4
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 1.3e-06 57.0 106 35.8
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 3.7e-06 55.5 109 33.0
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 6.3e-06 54.7 89 40.4


User provided reference genes

Program Settings