Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 4.9e-61 237.7 123 100.0
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 2.5e-49 198.7 161 70.2
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 2.3e-42 175.6 125 76.0
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 1.1e-41 173.3 122 75.4
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 2.4e-23 112.5 125 57.6
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 1.0e-21 107.1 112 56.2
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 1.3e-21 106.7 123 50.4
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 2.7e-19 99.0 75 62.7
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 3.6e-19 98.6 80 61.2
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 4.6e-19 98.2 125 50.4
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 3.9e-18 95.1 79 59.5
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 3.9e-18 95.1 100 54.0
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 6.7e-18 94.4 138 50.7
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.5e-17 93.2 61 73.8
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.5e-17 93.2 61 73.8
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 1.5e-17 93.2 80 58.8
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.5e-17 93.2 80 58.8
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 7.4e-17 90.9 109 51.4
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 1.3e-16 90.1 54 72.2
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 1.7e-16 89.7 130 50.0
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 4.8e-16 88.2 93 54.8
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.8e-15 86.3 73 60.3
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 2.4e-15 85.9 72 61.1
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 3.1e-15 85.5 45 82.2
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 6.9e-15 84.3 133 46.6
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 9.1e-15 84.0 82 57.3
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.5e-14 83.2 93 50.5
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.0e-14 82.8 93 50.5
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.0e-14 82.8 93 50.5
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 4.5e-14 81.6 68 57.4
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 1.3e-13 80.1 72 50.0
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.2e-13 79.3 110 51.8
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.2e-13 79.3 110 51.8
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 2.9e-13 79.0 96 47.9
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 2.9e-13 79.0 112 46.4
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 3.8e-13 78.6 120 42.5
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 5.0e-13 78.2 94 51.1
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 5.0e-13 78.2 110 49.1
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 8.5e-13 77.4 110 45.5
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 1.1e-12 77.0 72 54.2
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 1.9e-12 76.3 42 81.0
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 5.5e-12 74.7 121 43.0
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 7.2e-12 74.3 73 57.5
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 1.2e-11 73.6 114 42.1
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 1.2e-11 73.6 106 46.2
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.6e-11 73.2 71 53.5
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 2.1e-11 72.8 99 45.5
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 6.1e-11 71.2 125 42.4
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 7.9e-11 70.9 134 41.0
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 1.8e-10 69.7 75 46.7
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 3.0e-10 68.9 94 47.9
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 3.9e-10 68.6 91 46.2
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 6.7e-10 67.8 117 39.3
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 6.7e-10 67.8 95 42.1
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 8.8e-10 67.4 99 43.4
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 8.8e-10 67.4 121 42.1
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.1e-09 67.0 103 42.7
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 1.5e-09 66.6 117 39.3
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.5e-09 66.6 93 43.0
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 1.5e-09 66.6 68 50.0
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 2.0e-09 66.2 65 52.3
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 2.0e-09 66.2 67 52.2
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 2.6e-09 65.9 120 35.8
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 3.3e-09 65.5 108 40.7
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 3.3e-09 65.5 75 45.3
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 4.4e-09 65.1 38 65.8
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 7.4e-09 64.3 116 39.7
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 9.7e-09 63.9 43 62.8
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 2.2e-08 62.8 94 40.4
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 6.3e-08 61.2 115 40.0
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 8.2e-08 60.8 81 43.2
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 8.2e-08 60.8 42 61.9
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 1.4e-07 60.1 110 41.8
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 1.8e-07 59.7 120 35.8
BolC1t04820H Brassica oleracea HOM05D000771 ORTHO05D001963 1.8e-07 59.7 109 36.7
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 2.4e-07 59.3 120 33.3
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 3.1e-07 58.9 54 46.3
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 3.1e-07 58.9 54 48.1
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 9.1e-07 57.4 91 37.4
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 1.5e-06 56.6 41 65.9
C01p48660 Brassica napus HOM05D000771 ORTHO05D001963 2.0e-06 56.2 109 35.8
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 3.4e-06 55.5 54 44.4
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 3.4e-06 55.5 54 44.4
CARHR042660 Cardamine hirsuta HOM05D007722 ORTHO05D009730 3.4e-06 55.5 83 43.4


User provided reference genes

Program Settings