Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 1.8e-68 262.3 121 100.0
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 1.3e-42 176.4 86 94.2
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 2.3e-39 165.6 86 88.4
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 3.0e-39 165.2 86 88.4
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 8.8e-39 163.7 86 87.2
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 8.8e-39 163.7 84 88.1
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 8.8e-39 163.7 84 88.1
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 8.8e-39 163.7 84 90.5
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.5e-38 162.9 84 88.1
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 1.5e-38 162.9 86 87.2
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 2.6e-38 162.2 86 84.9
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 2.6e-38 162.2 86 83.7
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 4.4e-38 161.4 84 84.5
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 5.7e-38 161.0 86 86.0
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 7.5e-38 160.6 84 85.7
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 9.8e-38 160.2 116 66.4
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 1.3e-37 159.8 84 86.9
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 1.7e-37 159.5 84 86.9
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 2.2e-37 159.1 84 88.1
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 2.2e-37 159.1 84 85.7
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 2.2e-37 159.1 84 85.7
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 2.2e-37 159.1 84 85.7
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 2.2e-37 159.1 84 88.1
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 2.2e-37 159.1 116 69.0
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 2.8e-37 158.7 84 84.5
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 2.8e-37 158.7 82 89.0
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 3.7e-37 158.3 116 65.5
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 3.7e-37 158.3 84 83.3
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 4.9e-37 157.9 116 64.7
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 6.3e-37 157.5 82 84.1
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 8.3e-37 157.1 115 66.1
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 8.3e-37 157.1 84 82.1
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 8.3e-37 157.1 82 89.0
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 1.1e-36 156.8 84 84.5
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 1.1e-36 156.8 84 82.1
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 1.1e-36 156.8 84 84.5
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 1.4e-36 156.4 84 83.3
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 1.4e-36 156.4 84 85.7
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.8e-36 156.0 84 84.5
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.8e-36 156.0 84 84.5
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 1.8e-36 156.0 84 84.5
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 1.8e-36 156.0 84 84.5
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 2.4e-36 155.6 84 82.1
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 2.4e-36 155.6 84 83.3
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 3.1e-36 155.2 84 83.3
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 3.1e-36 155.2 84 82.1
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 3.1e-36 155.2 116 64.7
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.1e-36 155.2 116 64.7
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 3.1e-36 155.2 114 65.8
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 3.1e-36 155.2 83 84.3
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 3.1e-36 155.2 82 81.7
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 4.1e-36 154.8 84 83.3
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 5.4e-36 154.5 84 81.0
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 5.4e-36 154.5 84 81.0
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 5.4e-36 154.5 116 63.8
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 5.4e-36 154.5 84 83.3
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 5.4e-36 154.5 84 82.1
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 7.0e-36 154.1 84 81.0
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 9.2e-36 153.7 83 84.3
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 1.6e-35 152.9 84 81.0
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 1.6e-35 152.9 84 77.4
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 1.6e-35 152.9 82 84.1
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 2.0e-35 152.5 115 63.5
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 2.7e-35 152.1 84 78.6
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 2.7e-35 152.1 84 81.0
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 4.5e-35 151.4 83 79.5
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 4.5e-35 151.4 83 81.9
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 4.5e-35 151.4 84 81.0
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 4.5e-35 151.4 82 84.1
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 5.9e-35 151.0 84 79.8
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 7.8e-35 150.6 83 80.7
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 7.8e-35 150.6 116 62.9
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 1.0e-34 150.2 84 83.3
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 1.0e-34 150.2 83 80.7
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 1.0e-34 150.2 84 81.0
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 1.3e-34 149.8 82 80.5
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 1.3e-34 149.8 115 64.3
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 1.3e-34 149.8 84 79.8
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.7e-34 149.4 109 64.2
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 2.9e-34 148.7 84 78.6
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 6.6e-34 147.5 84 79.8
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 8.6e-34 147.1 80 81.2
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 2.5e-33 145.6 82 82.9
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 2.5e-33 145.6 84 79.8
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 3.3e-33 145.2 84 76.2
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 4.3e-33 144.8 79 82.3
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 1.2e-32 143.3 98 69.4
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 2.1e-32 142.5 92 70.7
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 4.7e-32 141.4 82 78.0
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 9.8e-30 133.7 108 55.6
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 9.8e-30 133.7 82 69.5
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 4.9e-29 131.3 84 66.7
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 3.2e-28 128.6 82 67.1
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.0e-26 123.6 65 84.6
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 1.5e-25 119.8 62 82.3
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 1.8e-23 112.8 79 65.8
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 1.6e-16 89.7 54 74.1


User provided reference genes

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