Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 1.9e-53 212.2 104 100.0
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 2.7e-44 181.8 105 87.6
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 3.9e-43 177.9 105 82.9
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 5.6e-42 174.1 104 85.6
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 2.7e-36 155.2 109 71.6
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 5.8e-31 137.5 109 63.3
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 1.0e-27 126.7 109 60.6
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 1.3e-27 126.3 108 63.0
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 1.3e-27 126.3 109 63.3
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 8.2e-17 90.5 108 53.7
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 3.1e-16 88.6 114 52.6
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 2.0e-15 85.9 114 50.0
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 5.9e-15 84.3 117 47.0
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 7.7e-15 84.0 111 49.5
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 1.3e-14 83.2 115 47.0
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 5.0e-14 81.3 121 43.0
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 8.5e-14 80.5 113 47.8
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 1.1e-13 80.1 114 48.2
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 1.1e-13 80.1 113 47.8
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 1.4e-13 79.7 116 44.8
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 1.9e-13 79.3 115 46.1
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 3.2e-13 78.6 111 45.9
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.2e-12 76.6 110 43.6
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.1e-12 75.9 115 45.2
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 4.6e-12 74.7 111 42.3
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 6.1e-12 74.3 114 46.5
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 7.9e-12 73.9 111 45.0
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 1.0e-11 73.6 115 44.3
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.0e-11 73.6 115 44.3
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 1.4e-11 73.2 112 46.4
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.8e-11 72.8 114 43.9
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.3e-11 72.4 116 44.0
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 2.3e-11 72.4 108 44.4
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 1.5e-10 69.7 106 42.5
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 2.0e-10 69.3 110 45.5
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 2.0e-10 69.3 98 44.9
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 2.5e-10 68.9 115 41.7
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 4.3e-10 68.2 111 41.4
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 5.7e-10 67.8 122 41.8
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 5.7e-10 67.8 117 40.2
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 5.7e-10 67.8 117 39.3
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 7.4e-10 67.4 111 40.5
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 7.4e-10 67.4 98 44.9
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 7.4e-10 67.4 109 43.1
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 1.3e-09 66.6 110 42.7
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 1.3e-09 66.6 123 40.7
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 1.3e-09 66.6 110 39.1
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 1.3e-09 66.6 113 41.6
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.7e-09 66.2 98 43.9
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 1.7e-09 66.2 115 39.1
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 3.7e-09 65.1 111 42.3
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 3.7e-09 65.1 116 40.5
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 4.8e-09 64.7 110 40.0
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 8.2e-09 63.9 108 40.7
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 8.2e-09 63.9 113 40.7
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 4.1e-08 61.6 88 43.2
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 9.1e-08 60.5 108 38.0
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 1.2e-07 60.1 109 39.4
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 2.0e-07 59.3 113 37.2
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 2.0e-07 59.3 44 68.2
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 3.4e-07 58.5 115 35.7
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 7.7e-07 57.4 108 36.1
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 1.0e-06 57.0 88 37.5
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 1.0e-06 57.0 121 38.0
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 1.7e-06 56.2 111 36.9
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 2.2e-06 55.8 107 36.4
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 3.8e-06 55.1 74 47.3


User provided reference genes

Program Settings