Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G011650 Glycine max HOM05D005171 ORTHO05D006343 7.8e-64 246.9 119 100.0
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 3.2e-33 145.2 88 78.4
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 4.6e-32 141.4 88 76.1
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 6.0e-32 141.0 88 76.1
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 3.7e-29 131.7 88 71.6
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 1.7e-26 122.9 87 72.4
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 7.9e-24 114.0 88 59.1
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 1.5e-22 109.8 87 62.1
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 1.5e-22 109.8 87 62.1
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 4.3e-22 108.2 88 58.0
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.6e-21 106.3 89 57.3
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 4.5e-19 98.2 87 56.3
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 7.7e-19 97.4 87 52.9
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 6.5e-18 94.4 87 52.9
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 6.7e-15 84.3 92 44.6
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 6.7e-15 84.3 92 44.6
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 6.3e-13 77.8 82 43.9
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 1.4e-12 76.6 82 43.9
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 2.4e-12 75.9 82 42.7
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 2.4e-12 75.9 87 41.4
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 2.4e-12 75.9 82 43.9
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 4.1e-12 75.1 89 42.7
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 5.3e-12 74.7 87 42.5
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 2.0e-11 72.8 82 42.7
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 3.4e-11 72.0 86 36.0
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 3.4e-11 72.0 86 39.5
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 4.5e-11 71.6 89 39.3
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 7.7e-11 70.9 84 39.3
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 1.0e-10 70.5 84 39.3
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.0e-10 70.5 84 39.3
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.0e-10 70.5 86 36.0
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.0e-10 70.5 87 36.8
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 2.2e-10 69.3 87 40.2
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 2.2e-10 69.3 75 44.0
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.2e-10 69.3 84 38.1
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 8.5e-10 67.4 82 36.6
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 1.1e-09 67.0 86 38.4
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 1.4e-09 66.6 88 37.5
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 3.2e-09 65.5 89 37.1
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 9.4e-09 63.9 82 35.4
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 9.4e-09 63.9 82 37.8
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 9.4e-09 63.9 88 35.2
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 1.2e-08 63.5 88 34.1
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 1.6e-08 63.2 87 36.8
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 1.6e-08 63.2 86 34.9
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 2.1e-08 62.8 87 36.8
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 2.1e-08 62.8 87 36.8
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 6.1e-08 61.2 87 32.2
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 6.1e-08 61.2 82 35.4
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 7.9e-08 60.8 87 35.6
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 7.9e-08 60.8 87 35.6
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 1.4e-07 60.1 81 37.0
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 1.4e-07 60.1 82 34.1
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 2.3e-07 59.3 87 34.5
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 3.9e-07 58.5 87 32.2
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 3.9e-07 58.5 87 34.5
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 3.9e-07 58.5 81 34.6
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 5.1e-07 58.2 85 37.6
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 6.7e-07 57.8 88 36.4
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 8.8e-07 57.4 87 34.5
arahy.Tifrunner.gnm1.ann1.PMM024 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.3e-06 55.5 60 46.7


User provided reference genes

Program Settings