Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 2.4e-181 638.6 307 100.0
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.8e-144 516.2 315 79.4
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.3e-142 510.0 317 79.2
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 4.3e-130 468.4 321 70.7
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 8.3e-126 454.1 307 71.7
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 5.4e-125 451.4 316 69.0
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.0e-123 447.2 318 69.8
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 5.0e-123 444.9 299 70.6
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.5e-122 443.4 294 70.7
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 5.6e-122 441.4 303 68.6
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 4.1e-117 425.2 264 74.2
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 2.5e-114 416.0 323 65.9
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 9.5e-114 414.1 301 66.4
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 6.8e-112 407.9 278 69.8
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 9.9e-111 404.1 326 61.3
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.2e-108 397.1 255 70.6
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 2.7e-108 396.0 262 68.7
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 3.3e-106 389.0 264 68.6
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 5.6e-106 388.3 261 67.8
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 5.6e-106 388.3 259 69.5
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 1.6e-105 386.7 259 69.1
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 2.1e-105 386.3 274 66.4
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 4.7e-105 385.2 256 69.9
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 3.1e-104 382.5 366 54.6
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 6.8e-104 381.3 262 67.9
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 2.2e-102 376.3 289 63.0
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 1.4e-101 373.6 257 67.7
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 5.4e-101 371.7 254 68.1
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 7.1e-101 371.3 286 62.2
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 9.3e-101 370.9 256 67.2
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 3.5e-100 369.0 256 67.2
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 6.0e-100 368.2 256 64.5
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 1.0e-99 367.5 256 64.5
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 1.3e-99 367.1 279 64.5
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.3e-99 367.1 254 66.1
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.3e-99 367.1 254 64.6
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 6.6e-99 364.8 250 68.0
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.5e-98 363.6 254 64.6
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 2.5e-98 362.8 256 63.7
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 7.3e-98 361.3 257 62.3
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 7.3e-98 361.3 257 64.2
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 9.6e-98 360.9 266 62.0
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 4.8e-97 358.6 250 62.8
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.1e-96 357.5 274 60.9
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 2.4e-96 356.3 282 63.5
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 3.1e-96 355.9 258 60.5
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 3.1e-96 355.9 267 61.0
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 9.0e-96 354.4 238 68.9
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 2.6e-95 352.8 265 63.0
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 2.6e-95 352.8 277 59.6
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 3.4e-95 352.4 285 59.6
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 9.9e-95 350.9 266 59.8
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.3e-94 350.5 250 62.0
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 2.2e-94 349.7 260 62.3
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 2.9e-94 349.4 249 61.4
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 2.9e-94 349.4 249 61.4
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 6.4e-94 348.2 250 61.2
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 1.4e-93 347.1 249 61.4
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.9e-93 346.7 237 65.8
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.9e-93 346.7 237 65.8
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 2.4e-93 346.3 273 60.8
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 2.4e-93 346.3 244 66.4
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 5.4e-93 345.1 251 60.6
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 1.6e-92 343.6 233 66.1
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 3.5e-92 342.4 264 58.7
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 4.6e-92 342.0 268 61.2
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-91 340.9 218 71.6
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 2.5e-90 336.3 259 60.6
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 2.1e-89 333.2 253 59.7
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 5.3e-88 328.6 297 56.6
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.9e-88 328.2 283 55.1
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 2.0e-87 326.6 248 61.7
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.4e-85 320.5 256 60.2
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 3.2e-85 319.3 250 63.2
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 2.1e-84 316.6 256 59.4
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 7.9e-84 314.7 272 58.1
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 3.7e-81 305.8 259 55.2
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 5.1e-75 285.4 264 54.5
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.5e-74 283.9 272 52.2
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 3.7e-73 279.3 253 54.9
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 4.8e-73 278.9 258 53.1
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 5.1e-67 258.8 203 59.1
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 2.7e-60 236.5 202 57.4
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 8.8e-59 231.5 243 50.6
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 9.1e-56 221.5 250 46.0
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 4.5e-55 219.2 140 68.6
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 1.4e-53 214.2 254 42.1
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 6.1e-52 208.8 258 40.3
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 6.3e-49 198.7 181 52.5
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.1e-48 196.4 108 78.7
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 2.3e-43 180.3 187 52.9
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.7e-43 178.7 246 37.8
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 1.5e-42 177.6 89 92.1
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 8.5e-38 161.8 85 80.0
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 8.0e-36 155.2 106 60.4
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.3e-30 137.9 143 51.7
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.1e-28 129.0 278 30.2
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 4.5e-23 112.8 83 57.8
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 7.3e-21 105.5 53 81.1
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 7.3e-21 105.5 53 81.1
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 2.1e-20 104.0 67 62.7
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 4.7e-20 102.8 73 67.1
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 4.7e-20 102.8 73 67.1
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 5.7e-18 95.9 57 71.9
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 3.0e-14 83.6 57 66.7
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 3.0e-14 83.6 57 66.7
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 6.8e-11 72.4 59 50.8
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 2.6e-10 70.5 42 69.0
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.4e-10 70.1 52 65.4
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.9e-09 67.0 72 44.4
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 3.7e-09 66.6 63 44.4
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 7.0e-08 62.4 32 84.4
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.6e-07 61.2 47 61.7
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 1.7e-06 57.8 46 50.0


User provided reference genes

Program Settings