Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 3.8e-51 204.5 103 100.0
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 2.0e-44 182.2 103 88.3
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 6.0e-44 180.6 103 88.3
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 1.7e-43 179.1 103 86.4
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.6e-41 172.6 103 83.5
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 2.6e-39 165.2 102 80.4
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 1.9e-37 159.1 97 77.3
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 9.2e-37 156.8 90 86.7
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 2.7e-36 155.2 103 79.6
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 1.7e-35 152.5 93 79.6
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 3.0e-35 151.8 102 75.5
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 3.9e-35 151.4 103 75.7
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.5e-34 149.4 97 77.3
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.3e-34 147.9 103 70.9
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 5.6e-34 147.5 102 72.5
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.6e-33 146.0 102 68.6
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 1.6e-33 146.0 102 72.5
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.6e-33 146.0 100 75.0
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 2.1e-33 145.6 103 71.8
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 6.2e-33 144.1 103 69.9
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 8.1e-33 143.7 104 70.2
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 8.1e-33 143.7 95 75.8
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 8.1e-33 143.7 89 78.7
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 8.1e-33 143.7 95 71.6
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 1.4e-32 142.9 89 82.0
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.4e-32 142.9 101 70.3
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 2.3e-32 142.1 100 72.0
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 2.3e-32 142.1 100 72.0
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 2.3e-32 142.1 100 72.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.1e-32 141.7 104 69.2
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 3.1e-32 141.7 103 69.9
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 6.8e-32 140.6 94 75.5
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 8.9e-32 140.2 103 70.9
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 1.2e-31 139.8 100 70.0
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 2.0e-31 139.0 100 70.0
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 2.6e-31 138.7 89 78.7
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 3.4e-31 138.3 87 77.0
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 3.4e-31 138.3 87 77.0
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 3.4e-31 138.3 87 77.0
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 4.4e-31 137.9 99 68.7
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 5.8e-31 137.5 89 75.3
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 5.8e-31 137.5 83 79.5
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 7.5e-31 137.1 87 77.0
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 7.5e-31 137.1 85 78.8
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 7.5e-31 137.1 93 68.8
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 7.5e-31 137.1 100 72.0
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 7.5e-31 137.1 101 66.3
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 9.9e-31 136.7 98 72.4
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 1.3e-30 136.3 100 70.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.7e-30 136.0 93 68.8
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 2.2e-30 135.6 103 66.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 2.2e-30 135.6 103 66.0
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 2.2e-30 135.6 102 66.7
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 2.9e-30 135.2 95 69.5
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 8.3e-30 133.7 93 67.7
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 8.3e-30 133.7 101 67.3
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.4e-29 132.9 83 78.3
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 1.9e-29 132.5 86 73.3
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 1.9e-29 132.5 82 76.8
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 4.1e-29 131.3 93 69.9
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 4.1e-29 131.3 92 67.4
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 4.1e-29 131.3 100 67.0
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 4.1e-29 131.3 93 71.0
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 4.1e-29 131.3 89 73.0
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 7.1e-29 130.6 85 75.3
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 7.1e-29 130.6 93 72.0
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 9.2e-29 130.2 100 68.0
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 1.6e-28 129.4 89 70.8
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 2.1e-28 129.0 100 67.0
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 2.7e-28 128.6 95 67.4
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 3.5e-28 128.3 100 67.0
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 6.0e-28 127.5 86 73.3
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 7.8e-28 127.1 96 66.7
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 1.0e-27 126.7 87 72.4
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 1.7e-27 125.9 93 66.7
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 6.6e-27 124.0 100 64.0
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 8.6e-27 123.6 103 61.2
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 1.9e-26 122.5 84 70.2
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 2.5e-26 122.1 82 70.7
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 3.3e-26 121.7 90 66.7
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 7.3e-26 120.6 83 67.5
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 7.3e-26 120.6 85 65.9
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.2e-25 119.8 84 70.2
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.2e-25 119.8 84 69.0
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 1.2e-25 119.8 102 58.8
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 1.6e-25 119.4 89 62.9
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 2.8e-25 118.6 86 66.3
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 2.8e-25 118.6 86 66.3
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 2.8e-25 118.6 86 66.3
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 2.8e-25 118.6 86 66.3
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 2.8e-25 118.6 86 66.3
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 2.8e-25 118.6 82 69.5
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 2.8e-25 118.6 104 58.7
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 3.6e-25 118.2 103 58.3
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 6.2e-25 117.5 99 61.6
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 8.1e-25 117.1 90 67.8
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 2.6e-23 112.1 104 56.7
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 7.6e-23 110.5 93 58.1
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 1.7e-22 109.4 80 65.0
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 8.4e-22 107.1 80 63.8
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.9e-21 105.9 93 58.1
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 1.9e-21 105.9 77 68.8
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 2.4e-21 105.5 89 58.4
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 7.8e-20 100.5 87 51.7
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.7e-19 99.4 87 50.6
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 5.1e-19 97.8 63 76.2
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 4.3e-18 94.7 81 50.6
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 9.6e-18 93.6 82 58.5
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 8.1e-17 90.5 89 48.3
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.9e-13 79.3 70 55.7
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 7.8e-12 73.9 84 41.7
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 3.0e-11 72.0 82 40.2
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 3.9e-11 71.6 85 45.9
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 2.8e-09 65.5 80 40.0
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 1.7e-06 56.2 92 38.0


User provided reference genes

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