Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G298400 Glycine max HOM05D004838 ORTHO05D005373 5.0e-34 147.1 70 100.0
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 1.1e-12 76.3 90 51.1
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 2.0e-11 72.0 90 48.9
Phvul.011G111100 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 7.7e-11 70.1 72 54.2
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 2.2e-10 68.6 94 42.6
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 2.2e-10 68.6 94 44.7
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 2.2e-10 68.6 90 46.7
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 2.9e-10 68.2 88 45.5
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 2.9e-10 68.2 94 44.7
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 2.9e-10 68.2 90 45.6
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 8.5e-10 66.6 85 42.4
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 1.9e-09 65.5 86 43.0
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 4.2e-09 64.3 85 42.4
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 4.2e-09 64.3 93 45.2
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 4.2e-09 64.3 87 43.7
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 1.2e-08 62.8 83 41.0
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 1.2e-08 62.8 91 45.1
Lj3g0021008 Lotus japonicus HOM05D004838 ORTHO05D005373 4.7e-08 60.8 69 50.7
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 4.7e-08 60.8 90 42.2
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 1.4e-07 59.3 88 38.6
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 5.2e-07 57.4 89 41.6
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 5.2e-07 57.4 89 39.3
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 6.7e-07 57.0 90 41.1
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 8.8e-07 56.6 93 36.6
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 1.2e-06 56.2 92 40.2
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 1.5e-06 55.8 95 34.7
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 1.5e-06 55.8 95 34.7
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 3.3e-06 54.7 94 37.2
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 3.3e-06 54.7 81 42.0
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 3.3e-06 54.7 90 40.0
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 3.3e-06 54.7 95 35.8
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 5.7e-06 53.9 93 38.7
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 7.5e-06 53.5 89 36.0
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 9.7e-06 53.1 88 38.6


User provided reference genes

Program Settings