Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G294300 Glycine max HOM05D000264 ORTHO05D000152 1.7e-85 319.3 165 100.0
Glyma.06G294000 Glycine max HOM05D000264 ORTHO05D000152 4.7e-43 178.3 101 90.1
Glyma.06G294400 Glycine max HOM05D000264 ORTHO05D000152 1.8e-42 176.4 186 57.0
Glyma.12G111400 Glycine max HOM05D000264 ORTHO05D000152 1.6e-38 163.3 182 53.8
Glyma.12G112400 Glycine max HOM05D000264 ORTHO05D000152 6.0e-30 134.8 185 49.7
Phvul.011G117400 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 1.7e-29 133.3 183 44.8
Glyma.06G294100 Glycine max HOM05D000264 ORTHO05D000152 6.6e-29 131.3 168 51.2
Glyma.06G293900 Glycine max HOM05D000264 ORTHO05D000152 9.6e-28 127.5 167 47.9
VMungo1127G0862 Vigna mungo HOM05D000264 ORTHO05D000152 1.3e-27 127.1 181 46.4
Glyma.12G111500 Glycine max HOM05D000264 ORTHO05D000152 1.1e-26 124.0 110 63.6
arahy.Tifrunner.gnm1.ann1.SP93FZ Arachis hypogaea HOM05D000264 ORTHO05D000152 2.4e-23 112.8 183 41.0
Glyma.06G294200 Glycine max HOM05D000264 ORTHO05D000152 3.3e-20 102.4 119 50.4
Eucgr.K00998 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.9e-14 81.3 133 36.1
Eucgr.E02497 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.6e-12 74.3 141 34.8
Lalb_Chr01g0005291 Lupinus albus HOM05D000264 ORTHO05D000152 9.6e-12 74.3 94 45.7
Eucgr.E03813 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.8e-11 72.8 127 36.2
Potri.018G077633 Populus trichocarpa HOM05D000264 ORTHO05D000152 4.8e-11 72.0 136 34.6
Eucgr.K00987 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.8e-10 70.1 138 35.5
Potri.018G077766 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.8e-10 70.1 121 36.4
Eucgr.K01004 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.1e-10 69.3 152 32.9
Sabra11G0081400 Salix brachista HOM05D000264 ORTHO05D000152 3.1e-10 69.3 133 30.1
Potri.018G078200 Populus trichocarpa HOM05D000264 ORTHO05D000152 4.0e-10 68.9 127 33.9
Potri.018G077250 Populus trichocarpa HOM05D000264 ORTHO05D000152 5.3e-10 68.6 121 35.5
Eucgr.K01002 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.9e-10 68.2 131 35.9
Potri.018G078450 Populus trichocarpa HOM05D000264 ORTHO05D000152 9.0e-10 67.8 127 33.1
Eucgr.K00989 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.4e-09 65.9 122 36.9
QL05p012151 Quercus lobata HOM05D000264 ORTHO05D000152 3.4e-09 65.9 173 32.9
Eucgr.K00973 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-08 63.9 128 35.9
TWI36G0192 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 1.7e-08 63.5 125 32.8
Potri.018G077500 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.2e-08 63.2 116 34.5
Potri.013G134500 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.9e-08 62.8 123 30.1
QL05p012353 Quercus lobata HOM05D000264 ORTHO05D000152 2.9e-08 62.8 82 41.5
Sc12g0002980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 4.9e-08 62.0 109 34.9
Eucgr.K00986 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.5e-08 61.6 122 32.8
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.1e-07 60.8 146 32.2
Eucgr.K00996 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.9e-07 60.1 140 33.6
Sabra11G0076700 Salix brachista HOM05D000264 ORTHO05D000152 3.2e-07 59.3 123 29.3
Eucgr.K00687 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.5e-07 58.5 165 27.3
Sabra19G0111500 Salix brachista HOM05D000264 ORTHO05D000152 5.5e-07 58.5 102 33.3
TWI75G0394 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 7.1e-07 58.2 170 27.6
Eucgr.K01000 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.2e-06 57.4 125 32.0
Sabra19G0112700 Salix brachista HOM05D000264 ORTHO05D000152 1.2e-06 57.4 101 31.7
Actinidia11042 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.1e-06 56.6 176 26.7
Potri.019G101500 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.7e-06 56.2 128 32.0
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.7e-06 56.2 157 31.2
CSS0035240 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 4.6e-06 55.5 111 32.4
Glyma.07G234701 Glycine max HOM05D000264 ORTHO05D000152 4.6e-06 55.5 40 62.5
Potri.013G133400 Populus trichocarpa HOM05D000264 ORTHO05D000152 4.6e-06 55.5 128 27.3
Eucgr.K01006 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.0e-06 55.1 127 29.9
Eucgr.K01014 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.0e-06 55.1 142 29.6
Potri.019G101700 Populus trichocarpa HOM05D000264 ORTHO05D000152 6.0e-06 55.1 101 28.7
COL.COLO4_10465 Corchorus olitorius HOM05D000264 ORTHO05D000152 7.9e-06 54.7 132 30.3


User provided reference genes

Program Settings