Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 3.4e-61 238.0 111 100.0
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.1e-32 143.3 124 64.5
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 5.6e-32 141.0 125 64.0
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 5.6e-32 141.0 125 64.0
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 5.6e-32 141.0 125 64.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 5.6e-32 141.0 125 64.0
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 7.4e-32 140.6 124 63.7
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 7.4e-32 140.6 124 63.7
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-31 139.4 125 63.2
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 2.1e-31 139.0 125 62.4
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 2.8e-31 138.7 125 63.2
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 3.7e-31 138.3 125 62.4
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 6.2e-31 137.5 126 61.9
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 6.2e-31 137.5 126 61.9
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 8.1e-31 137.1 125 62.4
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.1e-31 137.1 125 62.4
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 4.0e-30 134.8 126 62.7
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 4.0e-30 134.8 121 62.8
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 5.3e-30 134.4 125 61.6
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 5.3e-30 134.4 125 61.6
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 9.0e-30 133.7 125 61.6
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 1.5e-29 132.9 124 61.3
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 3.4e-29 131.7 126 60.3
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 3.4e-29 131.7 126 60.3
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 3.4e-29 131.7 124 62.1
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 9.9e-29 130.2 88 73.9
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-28 129.8 121 61.2
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.3e-28 129.8 91 71.4
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-28 128.6 88 72.7
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 3.8e-28 128.3 116 63.8
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 3.8e-28 128.3 116 63.8
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.9e-28 127.9 91 69.2
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 1.1e-27 126.7 89 71.9
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-27 126.3 88 71.6
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 1.4e-27 126.3 109 63.3
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.9e-27 125.9 116 62.1
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 2.7e-26 122.1 87 70.1
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 3.5e-26 121.7 91 68.1
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.9e-26 120.6 91 68.1
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-25 119.8 109 59.6
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.3e-25 119.0 125 56.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 3.0e-25 118.6 116 62.1
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.9e-25 118.2 122 54.1
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 5.1e-25 117.9 126 55.6
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.1e-25 117.9 91 67.0
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.7e-25 117.5 80 73.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.1e-24 116.7 111 63.1
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.1e-24 116.7 111 63.1
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-24 116.3 80 72.5
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-24 116.3 80 72.5
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-24 116.3 80 72.5
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-24 116.3 80 72.5
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-24 116.3 80 72.5
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.9e-24 115.9 91 67.0
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 3.3e-24 115.2 92 65.2
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 4.3e-24 114.8 126 56.3
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.6e-23 112.8 115 58.3
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 2.1e-23 112.5 107 61.7
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 4.8e-23 111.3 88 64.8
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 4.8e-23 111.3 123 54.5
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 6.2e-23 110.9 91 64.8
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-22 109.8 103 63.1
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.4e-22 109.8 78 71.8
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.4e-22 109.8 91 63.7
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 2.4e-22 109.0 78 71.8
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 4.0e-22 108.2 80 67.5
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 4.0e-22 108.2 111 58.6
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 5.3e-22 107.8 75 66.7
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 5.3e-22 107.8 75 66.7
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 6.9e-22 107.5 107 59.8
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.0e-21 105.9 110 59.1
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 2.6e-21 105.5 75 70.7
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 5.8e-21 104.4 88 64.8
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.6e-21 104.0 84 64.3
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.6e-21 104.0 84 64.3
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 2.9e-20 102.1 78 69.2
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.4e-20 100.5 84 63.1
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.4e-20 100.5 84 63.1
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.4e-20 100.5 84 63.1
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 3.2e-19 98.6 77 64.9
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 7.1e-19 97.4 106 53.8
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.3e-19 97.1 108 57.4
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 1.2e-18 96.7 57 77.2
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 2.7e-18 95.5 125 51.2
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 4.6e-18 94.7 81 65.4
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 6.0e-18 94.4 75 65.3
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.0e-17 93.6 75 68.0
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.0e-17 93.6 105 57.1
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.0e-17 93.6 105 57.1
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 2.3e-17 92.4 98 60.2
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 8.7e-17 90.5 61 72.1
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 1.1e-16 90.1 58 72.4
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-16 89.4 94 61.7
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.3e-16 88.6 70 70.0
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.6e-15 86.3 116 52.6
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.4e-14 83.2 87 59.8
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.2e-13 80.1 83 60.2
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 4.5e-13 78.2 49 73.5
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.2e-12 75.9 46 73.9
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 2.2e-12 75.9 85 57.6
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.8e-12 75.1 80 61.2
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 3.2e-11 72.0 46 69.6
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 4.2e-11 71.6 43 74.4
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.5e-11 71.2 83 56.6
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 5.5e-11 71.2 115 40.9
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 7.2e-11 70.9 46 69.6
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 4.6e-10 68.2 76 56.6
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 4.3e-08 61.6 80 43.8
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 7.4e-08 60.8 41 68.3
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.3e-07 57.8 73 54.8
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 1.1e-06 57.0 55 61.8
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 1.4e-06 56.6 42 69.0
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.8e-06 56.2 73 52.1


User provided reference genes

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