Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 5.8e-282 973.8 569 100.0
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 1.6e-159 567.0 575 59.5
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 2.5e-136 490.0 527 57.1
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 5.9e-125 452.2 580 51.4
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 7.9e-122 441.8 587 50.3
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 6.5e-100 369.0 586 44.7
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 4.1e-86 323.2 584 43.3
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 5.0e-84 316.2 577 41.1
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 4.1e-78 296.6 576 43.2
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.0e-76 292.0 575 46.8
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.1e-45 188.0 586 32.3
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 7.8e-45 186.0 585 31.8
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 2.1e-37 161.4 581 28.6
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 4.6e-37 160.2 577 29.8
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 3.9e-36 157.1 590 29.8
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 2.8e-34 151.0 569 28.6
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 2.4e-33 147.9 545 28.6
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 3.1e-33 147.5 619 28.4
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.4e-32 144.1 553 29.3
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 5.8e-32 143.3 543 29.1
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 4.9e-31 140.2 580 29.0
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 6.4e-31 139.8 574 29.1
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 1.4e-30 138.7 577 27.7
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 2.4e-30 137.9 582 27.8
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 2.7e-29 134.4 563 28.8
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.3e-28 131.3 245 40.8
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 3.9e-28 130.6 237 42.6
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 6.7e-28 129.8 557 28.5
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 1.1e-27 129.0 567 29.8
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.6e-27 125.9 319 35.7
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 9.6e-27 125.9 257 38.5
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 1.3e-26 125.6 296 38.2
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 4.8e-26 123.6 551 30.1
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 8.1e-26 122.9 571 26.3
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 1.4e-25 122.1 604 30.1
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.8e-25 121.7 234 40.2
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.0e-25 119.4 287 37.3
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.5e-24 118.6 292 37.0
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.2e-23 114.8 293 36.2
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.2e-23 114.8 245 39.2
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 5.5e-22 110.2 555 29.2
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 2.7e-21 107.8 500 29.4
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 6.0e-21 106.7 570 26.5
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 6.0e-21 106.7 537 27.6
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 1.0e-20 105.9 229 38.0
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.5e-19 102.1 223 35.4
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.5e-19 102.1 229 39.7
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 2.5e-19 101.3 474 28.1
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 1.3e-18 99.0 314 30.6
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.3e-18 99.0 325 32.0
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 2.8e-18 97.8 576 25.7
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 2.8e-18 97.8 302 34.1
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 8.2e-18 96.3 257 34.2
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 8.2e-18 96.3 234 35.5
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.8e-17 95.1 577 27.0
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 2.6e-16 91.3 252 33.7
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 3.4e-16 90.9 98 52.0
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 7.6e-16 89.7 286 34.3
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.0e-15 89.4 268 33.2
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 2.9e-15 87.8 217 37.8
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 2.9e-15 87.8 292 31.2
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 3.8e-15 87.4 230 38.3
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 4.9e-15 87.0 101 46.5
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 6.5e-15 86.7 239 35.1
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.1e-14 85.9 492 26.2
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 5.5e-14 83.6 220 34.5
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.8e-12 78.6 97 45.4
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 3.3e-11 74.3 568 23.4
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 2.2e-10 71.6 92 43.5
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 2.2e-10 71.6 210 33.3
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 2.8e-10 71.2 237 32.5
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.8e-09 68.6 201 33.8
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 5.3e-09 67.0 250 29.6
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 7.7e-08 63.2 130 38.5
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.0e-07 62.8 258 32.2
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.0e-07 62.8 254 29.1
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 8.5e-07 59.7 49 59.2
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.4e-06 58.9 189 32.3
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.4e-06 58.9 189 32.3


User provided reference genes

Program Settings