Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 2.5e-198 695.3 358 100.0
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 2.3e-180 635.6 358 92.2
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 7.8e-176 620.5 358 90.2
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.1e-166 590.1 361 85.3
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.1e-164 583.6 360 86.1
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 3.1e-164 582.0 361 86.1
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 7.1e-161 570.9 359 82.7
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 1.9e-158 562.8 359 83.3
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 5.1e-151 538.1 361 79.8
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.5e-150 536.6 361 80.9
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.8e-149 531.6 364 77.7
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 8.2e-149 530.8 360 79.4
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.4e-148 529.3 359 77.7
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 2.2e-146 522.7 362 77.6
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 2.9e-146 522.3 362 76.0
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 1.9e-145 519.6 359 76.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 4.2e-145 518.5 368 75.5
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.2e-144 516.9 360 75.8
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.7e-144 515.8 332 79.5
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 7.9e-144 514.2 297 89.6
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.0e-143 513.8 363 75.5
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.3e-143 513.5 374 74.9
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.3e-143 513.5 359 75.2
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 2.3e-143 512.7 360 75.3
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 5.1e-143 511.5 358 75.4
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.1e-142 510.4 364 74.7
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 3.3e-142 508.8 360 75.3
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 4.3e-142 508.4 336 79.2
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 5.7e-142 508.1 359 75.8
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 5.7e-142 508.1 359 74.1
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 2.2e-141 506.1 359 75.8
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 4.8e-141 505.0 363 74.4
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 8.2e-141 504.2 335 77.9
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.1e-140 503.8 330 79.7
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.4e-140 502.7 357 73.9
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 3.1e-140 502.3 336 78.6
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 4.1e-140 501.9 362 74.0
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 6.9e-140 501.1 360 75.8
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.0e-139 499.6 366 73.2
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.0e-139 499.6 362 73.5
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 2.6e-139 499.2 336 78.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 7.6e-139 497.7 362 73.5
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 7.6e-139 497.7 359 74.1
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 7.6e-139 497.7 364 72.5
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.0e-138 497.3 348 76.7
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 5.0e-138 495.0 360 74.2
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 6.5e-138 494.6 388 70.6
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 8.5e-138 494.2 359 73.8
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.1e-137 493.8 357 72.0
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 1.9e-137 493.0 359 74.4
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 4.2e-137 491.9 335 76.7
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.2e-137 491.1 333 76.9
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 7.2e-137 491.1 388 70.1
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 9.3e-137 490.7 335 76.7
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.2e-136 490.3 357 71.4
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 2.1e-136 489.6 335 77.0
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 3.6e-136 488.8 360 72.5
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 3.6e-136 488.8 336 77.1
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 3.6e-136 488.8 336 77.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 3.6e-136 488.8 362 72.4
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 4.6e-136 488.4 333 76.0
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 6.1e-136 488.0 330 76.4
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 6.1e-136 488.0 354 72.9
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 5.1e-135 485.0 336 74.4
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 6.7e-135 484.6 330 75.8
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 1.9e-134 483.0 330 75.8
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 2.5e-134 482.6 355 73.2
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 4.3e-134 481.9 336 74.1
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 7.4e-134 481.1 359 71.9
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 7.4e-134 481.1 335 75.5
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 9.7e-134 480.7 360 71.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 1.3e-133 480.3 359 71.6
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 8.2e-133 477.6 359 69.9
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 8.2e-133 477.6 348 73.9
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 1.1e-132 477.2 364 70.6
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 6.9e-132 474.6 360 71.7
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 9.1e-132 474.2 362 71.3
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 9.1e-132 474.2 362 71.3
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 1.5e-131 473.4 362 71.0
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 2.6e-131 472.6 362 70.7
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 3.4e-131 472.2 328 72.9
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 5.9e-131 471.5 360 71.4
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 5.9e-131 471.5 330 75.5
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 5.0e-130 468.4 363 70.8
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 1.4e-129 466.8 364 69.5
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 3.6e-128 462.2 358 69.0
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 2.5e-121 439.5 269 83.3
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 9.4e-121 437.6 359 67.1
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.8e-117 426.0 269 81.0
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.5e-110 403.7 332 62.7
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.7e-109 400.2 332 63.3
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.1e-105 387.5 355 61.4
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.5e-102 377.1 293 69.3
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 3.5e-99 365.9 329 59.3
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.4e-92 343.2 289 66.8
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.4e-87 327.4 269 69.9
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 4.3e-81 305.8 264 62.1
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.3e-74 284.3 341 48.4
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 3.0e-74 283.1 358 51.1
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.5e-73 280.8 271 59.8
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 3.4e-70 269.6 227 66.5
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 2.2e-69 266.9 332 47.6
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 7.1e-68 261.9 140 95.0
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 7.3e-65 251.9 302 48.3
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 9.5e-65 251.5 190 68.9
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.6e-64 250.8 340 45.3
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.4e-61 238.8 154 79.2
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.2e-56 222.2 185 65.9
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 2.4e-55 220.3 182 64.8
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 7.8e-51 205.3 197 56.3
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 2.1e-40 170.6 261 42.9
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.1e-39 168.3 139 63.3
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.4e-38 163.3 115 73.0
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.4e-38 163.3 91 90.1
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 9.3e-28 128.6 133 53.4
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 4.1e-23 113.2 66 84.8
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 5.0e-21 106.3 57 91.2
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 8.5e-21 105.5 142 50.7
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.0e-18 97.1 88 60.2
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 5.0e-13 79.7 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 2.5e-12 77.4 46 82.6
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 7.0e-07 59.3 50 58.0


User provided reference genes

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