Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G245500 Glycine max HOM05D010700 ORTHO05D012225 1.3e-84 316.2 147 100.0
Lj3g0005293 Lotus japonicus HOM05D010700 ORTHO05D012225 3.9e-41 171.8 143 50.3
TPR.G31965 Trifolium pratense HOM05D010700 ORTHO05D012225 1.4e-38 163.3 130 53.8
Glyma.06G245400 Glycine max HOM05D010700 ORTHO05D012225 9.1e-38 160.6 136 52.9
TPR.G21868 Trifolium pratense HOM05D010700 ORTHO05D012225 9.1e-38 160.6 132 51.5
Psat4g125080 Pisum sativum HOM05D010700 ORTHO05D012225 3.5e-37 158.7 134 47.0
Medtr2g438130 Medicago truncatula HOM05D010700 ORTHO05D012225 1.3e-36 156.8 132 49.2
Glyma.06G245700 Glycine max HOM05D010700 ORTHO05D012225 2.5e-35 152.5 148 46.6
TPR.G36159 Trifolium pratense HOM05D010700 ORTHO05D012225 1.0e-33 147.1 134 44.0
TPR.G15050 Trifolium pratense HOM05D010700 ORTHO05D012225 8.8e-33 144.1 143 39.2
Medtr8g063720 Medicago truncatula HOM05D010700 ORTHO05D012225 7.5e-32 141.0 140 42.9
Psat0ss9438g0040 Pisum sativum HOM05D010700 ORTHO05D012225 2.8e-31 139.0 132 42.4
Medtr6g007660 Medicago truncatula HOM05D010700 ORTHO05D012225 1.6e-29 133.3 136 39.7
Glyma.06G245800 Glycine max HOM05D010700 ORTHO05D012225 3.5e-29 132.1 127 45.7
Lalb_Chr19g0134241 Lupinus albus HOM05D010700 ORTHO05D012225 5.9e-29 131.3 134 44.0
Lalb_Chr19g0134251 Lupinus albus HOM05D010700 ORTHO05D012225 1.0e-28 130.6 132 43.2
Medtr5g097880 Medicago truncatula HOM05D010700 ORTHO05D012225 3.2e-27 125.6 115 44.3
CAN.G691.12 Capsicum annuum HOM05D011392 ORTHO05D001803 1.4e-09 67.0 117 27.4
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 1.4e-09 67.0 81 33.3
Eucgr.E01746 Eucalyptus grandis HOM05D067861 ORTHO05D012225 2.3e-09 66.2 135 28.9
Nitab4.5_0001427g0010 Nicotiana tabacum HOM05D022492 ORTHO05D025233 2.3e-09 66.2 71 38.0
PGSC0003DMG400016245 Solanum tuberosum HOM05D011392 ORTHO05D001803 3.1e-09 65.9 85 29.4
Peaxi162Scf00038g00002 Petunia axillaris HOM05D022492 ORTHO05D025233 4.0e-09 65.5 71 35.2
PGSC0003DMG400011221 Solanum tuberosum HOM05D022492 ORTHO05D025233 6.8e-09 64.7 77 35.1
COL.COLO4_10003 Corchorus olitorius HOM05D007923 ORTHO05D009651 5.8e-08 61.6 94 29.8
Solyc06g048400.1 Solanum lycopersicum HOM05D011392 ORTHO05D001803 9.8e-08 60.8 91 30.8
DCAR_020097 Daucus carota HOM05D022492 ORTHO05D025233 1.7e-07 60.1 85 32.9
QL02p094689 Quercus lobata HOM05D008402 ORTHO05D009651 4.9e-07 58.5 76 36.8
DCAR_002296 Daucus carota HOM05D010700 ORTHO05D012225 8.3e-07 57.8 76 34.2
Migut.K01315 Erythranthe guttata HOM05D008521 ORTHO05D012225 1.1e-06 57.4 162 24.1
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.1e-06 57.4 78 28.2
Thecc.07G084000 Theobroma cacao HOM05D002073 ORTHO05D001803 1.1e-06 57.4 159 22.0
Cpa.g.sc4.156 Carica papaya HOM05D007923 ORTHO05D009651 1.9e-06 56.6 86 25.6
PGSC0003DMG400027576 Solanum tuberosum HOM05D011392 ORTHO05D001803 1.9e-06 56.6 79 30.4
COL.COLO4_04380 Corchorus olitorius HOM05D002073 ORTHO05D001803 2.4e-06 56.2 160 25.6
Gohir.A04G043540 Gossypium hirsutum HOM05D002073 ORTHO05D001803 2.4e-06 56.2 72 33.3
THA.LOC104803521 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 2.4e-06 56.2 85 28.2
Prupe.6G170600 Prunus persica HOM05D002073 ORTHO05D001803 3.2e-06 55.8 84 29.8
Rhsim01G0015900 Rhododendron simsii HOM05D010700 ORTHO05D012225 3.2e-06 55.8 83 28.9
AL585U10010 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.1e-06 55.5 74 32.4
AL585U10020 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.1e-06 55.5 74 32.4
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.1e-06 55.5 141 22.7
AL8G17830 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.1e-06 55.5 74 32.4
AL8G17840 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.1e-06 55.5 74 32.4
AL8G17850 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.1e-06 55.5 74 32.4
C07p28950 Brassica napus HOM05D001614 ORTHO05D000988 4.1e-06 55.5 75 29.3
C07p28970 Brassica napus HOM05D001614 ORTHO05D000988 4.1e-06 55.5 75 29.3
C07p28980 Brassica napus HOM05D001614 ORTHO05D000988 4.1e-06 55.5 75 29.3
BolC7t43435H Brassica oleracea HOM05D001614 ORTHO05D000988 4.1e-06 55.5 75 29.3
BolC7t43438H Brassica oleracea HOM05D001614 ORTHO05D000988 4.1e-06 55.5 75 29.3
Prupe.6G170800 Prunus persica HOM05D002073 ORTHO05D001803 4.1e-06 55.5 84 28.6
Prupe.6G171100 Prunus persica HOM05D002073 ORTHO05D001803 4.1e-06 55.5 84 29.8
AL474U10010 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 5.4e-06 55.1 74 31.1
AL8G17820 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 5.4e-06 55.1 74 32.4
AL8G17860 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 5.4e-06 55.1 74 32.4
AL8G17870 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 5.4e-06 55.1 74 32.4
AL8G19270 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 5.4e-06 55.1 74 32.4
Gohir.D05G328735 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.4e-06 55.1 72 33.3
Ciclev10010294m.g Citrus clementina HOM05D002073 ORTHO05D001803 7.0e-06 54.7 76 32.9
Gohir.D01G184200 Gossypium hirsutum HOM05D008402 ORTHO05D000988 7.0e-06 54.7 82 29.3
Gorai.002G227700 Gossypium raimondii HOM05D008402 ORTHO05D000988 7.0e-06 54.7 82 29.3
C07p28820 Brassica napus HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
C07p28860 Brassica napus HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
C07p28870 Brassica napus HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
C07p28900 Brassica napus HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
C07p28910 Brassica napus HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
C07p28920 Brassica napus HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
C07p28940 Brassica napus HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43418H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43422H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43424H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43426H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43430H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43431H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43432H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43433H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
BolC7t43434H Brassica oleracea HOM05D001614 ORTHO05D000988 9.2e-06 54.3 75 29.3
COL.COLO4_20829 Corchorus olitorius HOM05D002073 ORTHO05D001803 9.2e-06 54.3 74 31.1


User provided reference genes

Program Settings