Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G245400 Glycine max HOM05D010700 ORTHO05D012225 1.1e-113 413.3 201 100.0
Glyma.06G245700 Glycine max HOM05D010700 ORTHO05D012225 1.5e-46 190.3 197 50.3
TPR.G21868 Trifolium pratense HOM05D010700 ORTHO05D012225 7.3e-46 188.0 194 46.4
Psat4g125080 Pisum sativum HOM05D010700 ORTHO05D012225 4.7e-45 185.3 196 40.8
Medtr2g438130 Medicago truncatula HOM05D010700 ORTHO05D012225 2.3e-44 183.0 192 42.7
TPR.G36159 Trifolium pratense HOM05D010700 ORTHO05D012225 8.3e-42 174.5 192 42.2
TPR.G31965 Trifolium pratense HOM05D010700 ORTHO05D012225 5.4e-41 171.8 192 41.1
Medtr8g063720 Medicago truncatula HOM05D010700 ORTHO05D012225 1.0e-39 167.5 193 39.9
Lalb_Chr19g0134241 Lupinus albus HOM05D010700 ORTHO05D012225 1.7e-39 166.8 198 44.4
TPR.G15050 Trifolium pratense HOM05D010700 ORTHO05D012225 1.1e-38 164.1 192 39.1
Psat0ss9438g0040 Pisum sativum HOM05D010700 ORTHO05D012225 7.3e-38 161.4 196 38.3
Glyma.06G245500 Glycine max HOM05D010700 ORTHO05D012225 4.7e-37 158.7 136 52.9
Lj3g0005293 Lotus japonicus HOM05D010700 ORTHO05D012225 4.9e-34 148.7 132 49.2
Glyma.06G245800 Glycine max HOM05D010700 ORTHO05D012225 1.1e-33 147.5 128 52.3
Medtr6g007660 Medicago truncatula HOM05D010700 ORTHO05D012225 6.0e-32 141.7 135 43.0
Lalb_Chr19g0134251 Lupinus albus HOM05D010700 ORTHO05D012225 2.1e-29 133.3 198 35.9
Medtr5g097880 Medicago truncatula HOM05D010700 ORTHO05D012225 3.5e-24 115.9 116 40.5
Dinv34528 Davidia involucrata HOM05D008521 ORTHO05D012225 3.3e-14 82.8 200 27.0
Migut.K01315 Erythranthe guttata HOM05D008521 ORTHO05D012225 3.4e-11 72.8 184 28.3
COL.COLO4_04380 Corchorus olitorius HOM05D002073 ORTHO05D001803 6.4e-10 68.6 213 23.0
Prupe.2G101000 Prunus persica HOM05D008521 ORTHO05D000988 1.9e-09 67.0 189 25.4
COL.COLO4_08463 Corchorus olitorius HOM05D002073 ORTHO05D001803 2.7e-08 63.2 210 21.9
Gohir.D05G328233 Gossypium hirsutum HOM05D002073 ORTHO05D001803 1.8e-07 60.5 136 26.5
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 3.0e-07 59.7 90 32.2
Thecc.07G084000 Theobroma cacao HOM05D002073 ORTHO05D001803 3.9e-07 59.3 157 23.6
DCAR_002296 Daucus carota HOM05D010700 ORTHO05D012225 6.7e-07 58.5 80 32.5
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 8.7e-07 58.2 79 30.4
Rhsim01G0015900 Rhododendron simsii HOM05D010700 ORTHO05D012225 8.7e-07 58.2 80 32.5
COL.COLO4_33207 Corchorus olitorius HOM05D001614 ORTHO05D000988 1.5e-06 57.4 88 29.5
Gohir.A04G043530 Gossypium hirsutum HOM05D002073 ORTHO05D001803 1.5e-06 57.4 74 32.4
Gohir.A05G328332 Gossypium hirsutum HOM05D002073 ORTHO05D001803 1.5e-06 57.4 71 31.0
Gohir.A04G043864 Gossypium hirsutum HOM05D002073 ORTHO05D001803 1.9e-06 57.0 74 32.4
Gohir.D05G326900 Gossypium hirsutum HOM05D002073 ORTHO05D001803 1.9e-06 57.0 74 32.4
Gohir.A04G043542 Gossypium hirsutum HOM05D002073 ORTHO05D001803 2.5e-06 56.6 74 31.1
Gohir.A04G043808 Gossypium hirsutum HOM05D002073 ORTHO05D001803 2.5e-06 56.6 74 32.4
Gohir.A04G043840 Gossypium hirsutum HOM05D002073 ORTHO05D001803 2.5e-06 56.6 74 32.4
Gohir.A04G043844 Gossypium hirsutum HOM05D002073 ORTHO05D001803 2.5e-06 56.6 74 32.4
Gohir.A04G043804 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 31.1
Gohir.A04G043812 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 32.4
Gohir.A04G043816 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 32.4
Gohir.A04G043820 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 32.4
Gohir.A04G043824 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 32.4
Gohir.A04G043828 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 32.4
Gohir.A04G049600 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 31.1
Gohir.D05G332213 Gossypium hirsutum HOM05D002073 ORTHO05D001803 3.3e-06 56.2 74 31.1
Gohir.A04G043540 Gossypium hirsutum HOM05D002073 ORTHO05D001803 4.3e-06 55.8 74 31.1
Gohir.A04G043700 Gossypium hirsutum HOM05D002073 ORTHO05D001803 4.3e-06 55.8 74 31.1
COL.COLO4_10003 Corchorus olitorius HOM05D007923 ORTHO05D009651 5.6e-06 55.5 80 30.0
Gohir.A04G043510 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.6e-06 55.5 74 31.1
Gohir.A04G043512 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.6e-06 55.5 74 31.1
Gohir.A04G043518 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.6e-06 55.5 74 31.1
Gohir.A04G043520 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.6e-06 55.5 74 31.1
Gohir.A04G043532 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.6e-06 55.5 74 31.1
Gohir.A04G043544 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.6e-06 55.5 74 31.1
Gohir.D05G332256 Gossypium hirsutum HOM05D002073 ORTHO05D001803 5.6e-06 55.5 74 31.1
Gorai.009G357500 Gossypium raimondii HOM05D002073 ORTHO05D001803 5.6e-06 55.5 95 28.4
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 5.6e-06 55.5 82 30.5
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 7.4e-06 55.1 80 31.2
Gohir.A04G043502 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 29.7
Gohir.A04G043514 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gohir.A04G043526 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gohir.A04G043534 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gohir.A04G043733 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gohir.A04G043832 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 32.4
Gohir.A04G043836 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 32.4
Gohir.A04G049750 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gohir.D05G327066 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gohir.D05G328700 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gohir.D05G332236 Gossypium hirsutum HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 31.1
Gorai.009G356600 Gossypium raimondii HOM05D002073 ORTHO05D001803 7.4e-06 55.1 74 32.4
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 9.6e-06 54.7 79 31.6
Gohir.A04G043506 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 31.1
Gohir.A04G043554 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 29.7
Gohir.A04G043576 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 29.7
Gohir.A04G043800 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 31.1
Gohir.A04G049656 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 31.1
Gohir.D05G327000 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 95 29.5
Gohir.D05G327100 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 31.1
Gohir.D05G328920 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 31.1
Gohir.D05G329231 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 31.1
Gohir.D05G332080 Gossypium hirsutum HOM05D002073 ORTHO05D001803 9.6e-06 54.7 74 31.1


User provided reference genes

Program Settings