Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 5.7e-294 1013.4 494 100.0
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 9.5e-265 916.4 500 91.4
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 3.3e-241 838.2 497 83.1
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 3.2e-236 821.6 498 82.5
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 1.9e-212 742.7 500 75.4
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 1.3e-205 719.9 490 74.1
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 8.5e-205 717.2 509 71.7
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.0e-202 710.3 513 71.7
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.1e-201 706.8 513 71.3
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 5.7e-201 704.5 496 72.4
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 4.5e-198 694.9 479 72.4
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 1.1e-193 680.2 493 70.6
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 1.6e-187 659.8 509 65.8
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 4.7e-187 658.3 515 67.0
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 1.4e-186 656.8 504 66.3
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 3.3e-185 652.1 509 65.6
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 7.5e-185 651.0 512 66.2
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 7.0e-183 644.4 500 67.2
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 1.7e-181 639.8 489 67.3
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 3.8e-181 638.6 531 61.8
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 5.0e-181 638.3 496 66.7
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.5e-177 626.7 507 64.9
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 5.4e-175 618.2 509 62.7
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.6e-174 616.7 520 64.2
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 2.0e-174 616.3 525 61.9
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.7e-174 615.9 504 62.3
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 3.5e-174 615.5 507 62.5
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 4.5e-174 615.1 507 62.7
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 3.8e-173 612.1 436 68.1
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.5e-172 610.1 530 62.8
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 1.2e-171 607.1 493 64.7
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 1.2e-171 607.1 484 62.2
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.6e-171 606.7 490 64.5
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.1e-171 606.3 493 65.5
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 3.6e-171 605.5 481 63.6
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 4.7e-171 605.1 512 60.9
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 8.0e-171 604.4 493 65.3
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 1.0e-170 604.0 495 64.4
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 3.0e-170 602.4 486 63.2
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.2e-169 600.5 493 64.5
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 9.8e-169 597.4 458 64.4
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 1.7e-168 596.7 512 61.7
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.7e-168 596.7 489 64.2
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 2.8e-168 595.9 488 63.7
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 4.9e-168 595.1 496 62.1
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.1e-167 594.0 460 64.6
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 1.8e-167 593.2 467 62.5
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.8e-167 593.2 449 65.5
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 4.1e-167 592.0 503 59.8
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.7e-166 589.3 492 61.6
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 1.0e-165 587.4 517 58.6
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.9e-165 585.9 537 59.2
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.5e-164 583.6 521 58.2
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.5e-164 583.6 444 64.0
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 1.5e-164 583.6 429 66.7
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.9e-164 583.2 499 61.1
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 7.3e-164 581.3 473 62.2
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 4.7e-163 578.6 496 61.1
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 5.2e-162 575.1 384 72.7
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 6.8e-162 574.7 479 62.0
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 6.8e-162 574.7 379 72.3
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 3.4e-161 572.4 450 64.7
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 3.4e-161 572.4 518 61.6
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 3.7e-160 568.9 487 59.3
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.4e-159 567.0 515 58.3
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 2.4e-159 566.2 491 60.7
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 7.0e-159 564.7 453 62.9
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 9.2e-159 564.3 497 59.2
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 1.6e-158 563.5 473 59.8
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 3.5e-158 562.4 460 61.1
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 8.6e-157 557.8 495 58.4
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 3.3e-156 555.8 504 58.9
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 9.5e-156 554.3 362 72.4
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 2.8e-155 552.7 495 57.6
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 2.8e-155 552.7 495 57.6
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 3.6e-155 552.4 497 58.4
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 4.7e-155 552.0 506 57.9
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 6.2e-155 551.6 459 61.0
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 1.8e-154 550.1 499 57.9
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 8.9e-154 547.7 503 57.7
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 5.8e-153 545.0 484 57.2
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 7.5e-153 544.7 481 59.5
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 1.7e-152 543.5 511 57.1
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 4.6e-150 535.4 512 56.8
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 4.3e-148 528.9 479 60.1
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 1.6e-147 526.9 459 59.0
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 6.2e-147 525.0 447 59.3
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 2.3e-146 523.1 693 44.9
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 4.0e-146 522.3 431 60.6
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 8.9e-146 521.2 428 62.6
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 5.8e-145 518.5 443 59.4
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 8.9e-138 494.6 493 56.4
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.5e-137 493.8 412 62.4
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 9.9e-137 491.1 418 58.6
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.2e-134 484.2 384 63.3
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 1.5e-113 414.1 254 76.0
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 9.9e-113 411.4 335 60.0
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 5.7e-92 342.4 239 70.3
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 3.7e-83 313.2 192 75.5
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 7.7e-81 305.4 305 57.0
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.3e-75 288.1 256 58.6
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.3e-75 288.1 317 52.4
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.3e-74 282.7 182 73.6
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 1.2e-73 281.6 247 59.9
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 4.7e-70 269.6 573 33.0
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.1e-66 256.9 221 53.8
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 7.2e-63 245.7 162 70.4
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 4.8e-59 233.0 266 52.6
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 5.0e-56 223.0 606 29.9
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 5.5e-55 219.5 627 28.7
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 1.0e-45 188.7 447 29.1
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 1.8e-37 161.4 148 57.4
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.4e-36 157.1 164 53.0
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 1.2e-33 148.7 362 29.0
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 1.2e-28 132.1 108 60.2
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.1e-25 121.3 82 65.9
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 4.9e-19 100.1 61 70.5
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 1.7e-16 91.7 128 42.2
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 4.0e-13 80.5 70 57.1
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.2e-12 79.0 68 58.8
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 1.5e-12 78.6 154 33.8
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-10 72.4 84 54.8
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 2.3e-08 64.7 42 64.3
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 2.3e-08 64.7 153 30.7
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 1.1e-07 62.4 76 44.7
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 3.6e-06 57.4 39 64.1


User provided reference genes

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