Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 5.7e-292 1006.9 526 100.0
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 6.0e-249 864.0 526 85.9
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 1.6e-238 829.3 526 82.7
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.4e-237 826.2 527 82.5
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 3.5e-233 811.6 527 81.4
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 5.1e-232 807.7 524 81.5
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 5.1e-232 807.7 524 81.5
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 2.5e-231 805.4 526 81.2
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 5.6e-231 804.3 526 80.8
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 1.2e-228 796.6 526 80.2
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 3.3e-199 698.7 451 81.8
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 4.8e-198 694.9 526 70.2
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 1.6e-193 679.9 526 68.8
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 3.9e-192 675.2 526 68.1
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 8.8e-192 674.1 526 67.1
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 3.3e-191 672.2 526 67.5
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 3.3e-191 672.2 526 66.5
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 7.4e-191 671.0 529 68.2
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.3e-190 670.2 526 67.1
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.2e-190 669.5 526 66.7
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 3.1e-189 665.6 526 66.3
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 4.1e-189 665.2 526 67.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 1.2e-188 663.7 526 66.2
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.5e-188 663.3 526 67.1
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 2.0e-188 662.9 529 68.4
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 2.0e-188 662.9 526 66.0
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 2.6e-188 662.5 526 66.9
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 4.5e-188 661.8 526 66.2
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 2.9e-187 659.1 526 66.2
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 3.8e-187 658.7 526 66.9
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 8.5e-187 657.5 526 67.1
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 8.5e-187 657.5 526 65.8
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 4.2e-186 655.2 526 65.8
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 2.7e-185 652.5 526 65.6
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 2.3e-184 649.4 540 64.3
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 3.0e-184 649.0 524 66.2
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 5.1e-184 648.3 525 65.5
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 2.2e-182 642.9 520 66.5
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 9.1e-181 637.5 539 63.1
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 2.6e-180 636.0 425 80.0
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.9e-179 632.5 540 63.1
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 3.6e-177 625.5 526 62.7
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.7e-177 625.2 548 61.5
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 6.1e-177 624.8 548 61.5
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.4e-176 623.6 526 63.1
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.6e-175 619.4 524 62.8
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 4.8e-174 615.1 524 61.8
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 1.1e-173 614.0 524 61.5
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.4e-173 612.8 524 61.3
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 3.1e-173 612.5 521 61.0
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.2e-172 610.5 538 62.1
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 4.5e-172 608.6 526 62.4
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 2.2e-171 606.3 526 61.8
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 6.5e-171 604.7 525 61.9
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 9.4e-170 600.9 524 60.3
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 1.2e-169 600.5 560 58.4
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 2.1e-169 599.7 525 60.8
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 8.0e-169 597.8 524 59.5
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 1.8e-168 596.7 526 61.4
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 3.0e-168 595.9 526 61.8
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 2.0e-167 593.2 642 53.0
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 4.4e-167 592.0 568 58.8
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 1.7e-166 590.1 527 60.7
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 4.8e-166 588.6 465 68.6
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 5.4e-165 585.1 527 60.2
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.6e-164 583.6 526 60.5
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 6.1e-161 571.6 526 58.4
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 2.6e-159 566.2 526 58.2
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 5.4e-157 558.5 526 57.2
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.0e-156 556.6 526 58.4
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 5.9e-156 555.1 526 57.8
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 1.5e-154 550.4 527 56.0
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 1.9e-154 550.1 519 58.2
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 4.7e-153 545.4 526 55.1
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 4.7e-153 545.4 527 56.2
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 8.9e-152 541.2 525 56.2
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.3e-150 537.3 553 54.1
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 1.3e-150 537.3 526 56.8
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 2.2e-150 536.6 569 53.1
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 3.7e-150 535.8 541 54.5
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 1.1e-149 534.3 465 62.2
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 4.6e-148 528.9 538 55.8
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.0e-147 527.7 554 53.2
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.7e-147 526.9 522 55.4
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 1.2e-145 520.8 527 55.0
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 2.4e-141 506.5 452 59.1
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 1.2e-135 487.6 524 50.0
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 3.0e-131 473.0 521 48.2
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 8.9e-128 461.5 392 63.0
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 5.1e-123 445.7 395 61.0
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.5e-114 417.5 410 57.3
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 9.3e-109 398.3 425 53.6
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.9e-107 392.9 524 45.6
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 1.5e-98 364.4 324 59.3
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.6e-97 360.9 341 56.9
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.1e-90 338.2 380 51.1
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.4e-90 335.5 293 58.7
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.4e-90 335.5 293 58.7
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 2.1e-84 317.4 520 36.7
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 1.7e-78 297.7 164 92.1
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 2.2e-78 297.4 354 50.6
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 9.4e-77 292.0 535 34.8
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 6.9e-72 275.8 198 70.7
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 9.1e-72 275.4 238 63.4
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.9e-69 267.7 532 33.8
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.5e-69 267.3 266 56.8
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 8.0e-60 235.7 294 52.0
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 6.1e-52 209.5 231 50.2
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 8.0e-52 209.1 163 63.2
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 5.2e-51 206.5 178 58.4
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.7e-44 183.3 470 29.4
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 2.5e-37 161.0 293 37.9
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.2e-34 152.1 97 77.3
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.9e-33 147.5 107 65.4
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 3.0e-30 137.5 126 57.1
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 3.3e-21 107.5 95 63.2
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.4e-19 102.1 137 39.4
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 2.0e-18 98.2 101 52.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-13 82.0 77 50.6
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 3.2e-08 64.3 97 44.3
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 2.7e-07 61.2 64 56.2
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 3.5e-07 60.8 241 25.7
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 3.0e-06 57.8 69 55.1
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 6.6e-06 56.6 52 55.8


User provided reference genes

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