Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 5.4e-27 123.6 64 100.0
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 8.0e-23 109.8 62 87.1
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.0e-22 109.4 62 87.1
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.5e-21 105.5 62 82.3
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 1.5e-21 105.5 62 82.3
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 3.7e-20 100.9 62 74.2
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 3.7e-20 100.9 62 72.6
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 3.7e-20 100.9 62 74.2
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 6.4e-20 100.1 62 79.0
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.1e-19 99.4 62 75.8
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.8e-19 98.6 62 71.0
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.8e-19 98.6 62 79.0
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.8e-19 98.6 62 79.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 2.4e-19 98.2 62 75.8
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 3.2e-19 97.8 62 71.0
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 3.2e-19 97.8 62 75.8
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 4.1e-19 97.4 62 72.6
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 4.1e-19 97.4 62 69.4
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 5.4e-19 97.1 62 69.4
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 5.4e-19 97.1 62 69.4
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 7.0e-19 96.7 62 69.4
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 9.2e-19 96.3 62 67.7
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.2e-18 95.9 62 71.0
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.6e-18 95.5 62 71.0
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.6e-18 95.5 62 69.4
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 2.7e-18 94.7 62 67.7
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 2.7e-18 94.7 62 67.7
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.7e-18 94.7 62 71.0
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 2.7e-18 94.7 62 69.4
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.5e-18 94.4 62 69.4
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.5e-18 94.4 62 69.4
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 4.6e-18 94.0 62 69.4
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 5.9e-18 93.6 62 67.7
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 5.9e-18 93.6 62 67.7
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 5.9e-18 93.6 62 66.1
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 5.9e-18 93.6 62 71.0
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 7.8e-18 93.2 62 66.1
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 7.8e-18 93.2 62 67.7
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 7.8e-18 93.2 63 66.7
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 7.8e-18 93.2 62 69.4
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.0e-17 92.8 62 66.1
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.3e-17 92.4 62 64.5
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 1.3e-17 92.4 62 66.1
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.3e-17 92.4 62 72.6
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 1.7e-17 92.0 62 69.4
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.7e-17 92.0 62 67.7
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 2.3e-17 91.7 62 66.1
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 2.3e-17 91.7 62 67.7
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 2.3e-17 91.7 62 69.4
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 3.0e-17 91.3 62 69.4
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.9e-17 90.9 62 64.5
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 3.9e-17 90.9 62 64.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 5.0e-17 90.5 60 73.3
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 5.0e-17 90.5 63 65.1
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 6.6e-17 90.1 62 66.1
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 8.6e-17 89.7 62 62.9
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 8.6e-17 89.7 62 69.4
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 8.6e-17 89.7 62 62.9
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.1e-16 89.4 62 67.7
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.1e-16 89.4 62 67.7
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.1e-16 89.4 60 66.7
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 3.3e-16 87.8 62 69.4
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 4.3e-16 87.4 62 61.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.3e-16 87.4 62 62.9
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.3e-16 87.4 62 62.9
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.6e-16 87.0 62 64.5
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.6e-16 87.0 62 64.5
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 5.6e-16 87.0 62 72.6
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 7.3e-16 86.7 62 62.9
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 9.5e-16 86.3 61 65.6
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.2e-15 85.9 62 64.5
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.2e-15 85.9 62 64.5
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.2e-15 85.9 62 64.5
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.2e-15 85.9 62 62.9
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.1e-15 85.1 60 65.0
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.1e-15 85.1 60 65.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.1e-15 85.1 60 65.0
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 2.8e-15 84.7 62 64.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 3.6e-15 84.3 60 65.0
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 4.7e-15 84.0 62 61.3
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 1.0e-14 82.8 66 62.1
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.0e-14 82.8 62 61.3
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 4.0e-14 80.9 62 61.3
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.2e-13 79.3 52 65.4
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 4.4e-13 77.4 60 56.7
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 4.4e-13 77.4 62 59.7
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 2.9e-12 74.7 62 56.5
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 4.9e-12 73.9 62 53.2
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 7.8e-10 66.6 43 67.4
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.3e-09 65.1 42 61.9
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 3.3e-08 61.2 62 45.2
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 4.3e-08 60.8 60 46.7
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.1e-07 58.5 60 46.7
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 6.2e-07 57.0 62 43.5
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.1e-06 56.2 43 62.8


User provided reference genes

Program Settings