Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G217600 Glycine max HOM05D006756 ORTHO05D001869 3.6e-163 578.2 291 100.0
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 1.3e-133 479.9 289 85.8
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 1.5e-97 360.1 289 68.5
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 1.5e-92 343.6 290 63.8
Psat1g024440 Pisum sativum HOM05D006756 ORTHO05D001869 2.8e-91 339.3 291 65.3
TPR.G9536 Trifolium pratense HOM05D006756 ORTHO05D001869 8.2e-91 337.8 289 63.7
Medtr7g033910 Medicago truncatula HOM05D006756 ORTHO05D001869 4.1e-90 335.5 288 62.2
Lj1g0024911 Lotus japonicus HOM05D006756 ORTHO05D001869 2.6e-89 332.8 290 62.8
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 4.5e-89 332.0 289 61.2
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 5.9e-89 331.6 290 63.1
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 1.4e-82 310.5 292 59.6
Phvul.009G207200 Phaseolus vulgaris HOM05D006756 ORTHO05D001869 2.4e-82 309.7 245 69.0
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 4.1e-82 308.9 292 59.6
TWI34G1307 Tripterygium wilfordii HOM05D006756 ORTHO05D001869 6.4e-51 205.3 294 42.9
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 1.1e-50 204.5 292 44.5
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 9.2e-50 201.4 292 43.8
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 2.7e-49 199.9 291 44.3
Manes.14G133500 Manihot esculenta HOM05D006756 ORTHO05D001869 3.5e-49 199.5 293 43.7
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 6.0e-49 198.7 289 43.6
Duzib168G2156 Durio zibethinus HOM05D006756 ORTHO05D001869 6.6e-48 195.3 281 44.5
Thecc.09G128500 Theobroma cacao HOM05D006756 ORTHO05D001869 9.5e-47 191.4 289 42.2
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 8.9e-45 184.9 300 40.7
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 1.4e-42 177.6 290 40.3
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 2.4e-42 176.8 292 41.8
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 4.1e-42 176.0 313 39.6
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 3.5e-41 172.9 326 39.0
Eucgr.C01517 Eucalyptus grandis HOM05D006756 ORTHO05D001869 6.0e-41 172.2 293 42.3
COL.COLO4_35103 Corchorus olitorius HOM05D006756 ORTHO05D001869 1.7e-40 170.6 285 41.1
Sabra18G0110400 Salix brachista HOM05D006756 ORTHO05D001869 2.5e-39 166.8 291 40.5
CSS0003155 Camellia sinensis var. sinensis HOM05D006756 ORTHO05D001869 3.3e-39 166.4 283 39.9
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 9.6e-39 164.9 305 39.3
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 3.6e-38 162.9 291 40.5
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 1.5e-36 157.5 290 37.9
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 1.5e-36 157.5 288 40.3
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.5e-36 157.5 305 37.4
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 2.6e-36 156.8 289 40.5
Prupe.7G245100 Prunus persica HOM05D006756 ORTHO05D001869 7.6e-36 155.2 288 39.9
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 1.7e-35 154.1 290 36.9
Cfa003391 Carpinus fangiana HOM05D006756 ORTHO05D001869 1.7e-35 154.1 295 37.6
Haze_25558 Corylus avellana HOM05D006756 ORTHO05D001869 2.9e-35 153.3 297 37.7
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 1.1e-34 151.4 290 38.3
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 1.3e-32 144.4 294 38.4
CsaV3_1G030330 Cucumis sativus L. HOM05D006756 ORTHO05D001869 3.9e-32 142.9 295 38.3
PGR142G2180 Punica granatum HOM05D006756 ORTHO05D001869 5.6e-31 139.0 296 39.5
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 3.6e-30 136.3 292 39.0
FvH4_1g03050 Fragaria vesca HOM05D006756 ORTHO05D001869 4.8e-30 136.0 288 37.2
FAN26G0517 Fragaria x ananassa HOM05D006756 ORTHO05D001869 6.2e-30 135.6 288 38.9
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 6.9e-29 132.1 316 34.8
FAN23G1563 Fragaria x ananassa HOM05D006756 ORTHO05D001869 2.0e-28 130.6 280 39.6
Migut.K00444 Erythranthe guttata HOM05D006756 ORTHO05D001869 3.4e-28 129.8 287 37.3
FAN28G3026 Fragaria x ananassa HOM05D006756 ORTHO05D001869 4.4e-28 129.4 288 37.8
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 9.9e-28 128.3 291 33.7
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 1.3e-27 127.9 283 35.3
PSO170G5619 Papaver somniferum HOM05D006756 ORTHO05D001869 1.7e-27 127.5 304 36.5
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 8.4e-27 125.2 281 34.2
Solyc07g008190.4 Solanum lycopersicum HOM05D006756 ORTHO05D001869 8.4e-27 125.2 313 32.6
Sopen07g004070 Solanum pennellii HOM05D006756 ORTHO05D001869 8.4e-27 125.2 314 32.8
CAN.G573.9 Capsicum annuum HOM05D006756 ORTHO05D001869 1.9e-26 124.0 309 32.4
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 2.4e-26 123.6 308 37.0
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 9.3e-26 121.7 312 31.4
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 9.3e-26 121.7 346 32.9
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 1.2e-25 121.3 304 36.5
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 1.2e-25 121.3 323 32.8
Cc06_g08320 Coffea canephora HOM05D006756 ORTHO05D001869 1.6e-25 120.9 298 32.6
ECA236G0350 Erigeron canadensis HOM05D006756 ORTHO05D001869 1.6e-25 120.9 283 35.0
SGA_v2.0_scaffold464G52008 Striga asiatica HOM05D006756 ORTHO05D001869 2.1e-25 120.6 293 36.2
Nitab4.5_0006268g0010 Nicotiana tabacum HOM05D006756 ORTHO05D001869 3.5e-25 119.8 322 31.4
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 1.5e-23 114.4 314 33.1
Gohir.D05G016600 Gossypium hirsutum HOM05D006756 ORTHO05D001869 3.6e-22 109.8 289 32.5
Carub.0006s1860 Capsella rubella HOM05D006756 ORTHO05D001869 6.2e-22 109.0 300 33.7
Oeu058044.1 Olea europaea HOM05D006756 ORTHO05D001869 6.2e-22 109.0 302 33.8
BcaC03g13743 Brassica carinata HOM05D006756 ORTHO05D001869 8.1e-22 108.6 312 30.1
unitig_748.g7157 Utricularia gibba HOM05D006756 ORTHO05D001869 1.1e-21 108.2 306 30.7
BcaC04g19408 Brassica carinata HOM05D006756 ORTHO05D001869 1.8e-21 107.5 305 32.8
Nitab4.5_0000028g0240 Nicotiana tabacum HOM05D006756 ORTHO05D001869 4.0e-21 106.3 323 28.5
Duzib187G1404 Durio zibethinus HOM05D006756 ORTHO05D001869 1.2e-20 104.8 291 33.0
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 2.0e-20 104.0 296 32.4
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.6e-20 103.6 295 31.2
BraA10t44048Z Brassica rapa HOM05D006756 ORTHO05D001869 2.6e-20 103.6 309 31.4
CARHR192620 Cardamine hirsuta HOM05D006756 ORTHO05D001869 2.6e-20 103.6 304 33.2
Sp6g24200 Schrenkiella parvula HOM05D006756 ORTHO05D001869 3.4e-20 103.2 314 33.1
Thhalv10012771m.g Eutrema salsugineum HOM05D006756 ORTHO05D001869 7.6e-20 102.1 308 33.1
BcaB08g36540 Brassica carinata HOM05D006756 ORTHO05D001869 1.3e-19 101.3 311 32.2
AT5G20200 Arabidopsis thaliana HOM05D006756 ORTHO05D001869 3.8e-19 99.8 318 30.5
BcaB05g22863 Brassica carinata HOM05D006756 ORTHO05D001869 3.8e-19 99.8 309 31.4
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 6.4e-19 99.0 314 30.9
Sed0004031 Sechium edule HOM05D006756 ORTHO05D001869 1.4e-18 97.8 291 35.7
Actinidia40482 Actinidia chinensis HOM05D006756 ORTHO05D001869 7.1e-18 95.5 125 44.0
DCAR_017806 Daucus carota HOM05D006756 ORTHO05D001869 7.1e-18 95.5 309 31.1
AL6G31760 Arabidopsis lyrata HOM05D006756 ORTHO05D001869 1.6e-17 94.4 314 29.6
Lsat_1_v5_gn_8_58441 Lactuca sativa HOM05D006756 ORTHO05D001869 1.6e-17 94.4 291 33.0
HanXRQChr05g0140231 Helianthus annuus HOM05D006756 ORTHO05D001869 3.9e-16 89.7 118 43.2
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 6.7e-16 89.0 308 30.2
Ah.09g225260 Amaranthus hybridus HOM05D006756 ORTHO05D001869 5.6e-15 85.9 305 30.2
PSO017G1072 Papaver somniferum HOM05D006756 ORTHO05D001869 5.6e-15 85.9 304 31.9
Sed0021917 Sechium edule HOM05D006756 ORTHO05D001869 1.6e-14 84.3 221 33.5
EL10Ac8g18682 Beta vulgaris HOM05D006756 ORTHO05D001869 2.4e-13 80.5 298 31.9
SalBow1G7291 Salvia bowleyana HOM05D006756 ORTHO05D001869 5.3e-13 79.3 305 28.5
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.2e-09 68.2 90 45.6
Duzib150G0144 Durio zibethinus HOM05D006756 ORTHO05D001869 5.1e-08 62.8 141 30.5
A02p06100 Brassica napus HOM05D006756 ORTHO05D001869 1.9e-07 60.8 62 53.2
Medtr7g033940 Medicago truncatula HOM05D000051 ORTHO05D000015 3.3e-07 60.1 50 62.0
ATR1120G177 Amborella trichopoda HOM05D006756 ORTHO05D001869 8.2e-06 55.5 90 36.7


User provided reference genes

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