Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 3.8e-51 204.5 102 100.0
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 6.1e-49 197.2 102 96.1
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 3.3e-47 191.4 102 90.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.7e-46 189.1 103 93.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.8e-46 188.3 103 92.2
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.1e-45 184.9 103 90.3
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 7.0e-45 183.7 102 87.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 7.0e-45 183.7 102 87.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.2e-44 183.0 102 85.3
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.0e-44 182.2 102 84.3
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.1e-42 176.4 101 79.2
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.1e-42 176.4 101 81.2
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.1e-42 176.4 101 81.2
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.1e-42 176.4 101 81.2
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.5e-42 175.3 101 79.2
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 4.2e-42 174.5 101 81.2
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.2e-41 172.9 102 77.5
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 4.7e-41 171.0 102 75.5
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 6.1e-41 170.6 101 78.2
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 8.0e-41 170.2 101 77.2
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.4e-40 169.5 101 77.2
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.3e-40 168.7 101 77.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 2.3e-40 168.7 102 74.5
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 8.8e-40 166.8 101 78.2
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.2e-39 166.4 102 76.5
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 2.0e-39 165.6 101 75.2
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.6e-39 165.2 101 76.2
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 2.6e-39 165.2 101 74.3
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 3.3e-39 164.9 99 74.7
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.7e-38 162.5 96 77.1
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 3.7e-38 161.4 100 74.0
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 6.3e-38 160.6 101 73.3
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 8.2e-38 160.2 101 71.3
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.1e-37 159.8 100 74.0
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 1.4e-37 159.5 100 72.0
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 2.4e-37 158.7 100 75.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 9.1e-37 156.8 101 73.3
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 9.1e-37 156.8 101 73.3
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.1e-37 156.8 100 71.0
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.2e-36 156.4 100 74.0
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 1.6e-36 156.0 101 71.3
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 2.0e-36 155.6 97 74.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.0e-36 155.6 101 73.3
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.7e-36 155.2 102 70.6
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 2.7e-36 155.2 100 70.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 3.5e-36 154.8 101 69.3
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 5.9e-36 154.1 96 75.0
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 5.9e-36 154.1 97 71.1
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.9e-36 154.1 92 77.2
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 7.7e-36 153.7 97 72.2
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.0e-35 153.3 97 71.1
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.3e-35 152.9 101 69.3
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.3e-35 152.9 81 95.1
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.2e-35 152.1 101 69.3
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.2e-35 152.1 93 73.1
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.2e-35 152.1 97 68.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.9e-35 151.8 96 72.9
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.9e-35 151.8 96 72.9
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.9e-35 151.8 96 72.9
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.9e-35 151.8 101 68.3
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.9e-35 151.8 101 68.3
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 3.8e-35 151.4 101 68.3
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 3.8e-35 151.4 95 73.7
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.8e-35 151.4 93 73.1
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 5.0e-35 151.0 100 69.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 5.0e-35 151.0 97 70.1
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 6.5e-35 150.6 100 69.0
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 8.5e-35 150.2 93 75.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 8.5e-35 150.2 99 70.7
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 9.4e-34 146.7 100 68.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 9.4e-34 146.7 131 55.7
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.1e-33 145.6 145 54.5
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.1e-33 145.6 101 66.3
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.7e-33 145.2 103 69.9
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.7e-33 145.2 99 70.7
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.6e-33 144.8 103 68.9
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.6e-33 144.8 103 68.9
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 4.7e-33 144.4 98 71.4
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 6.1e-33 144.1 92 73.9
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.0e-32 143.3 96 67.7
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 1.0e-32 143.3 103 68.9
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.4e-32 142.9 80 88.8
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 2.3e-32 142.1 96 67.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 3.0e-32 141.7 86 75.6
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 3.0e-32 141.7 103 68.9
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 5.2e-32 141.0 95 70.5
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 5.2e-32 141.0 101 69.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.2e-32 141.0 90 72.2
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.5e-31 139.4 103 67.0
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.6e-31 138.7 95 68.4
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.2e-30 135.6 80 81.2
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.8e-30 135.2 96 64.6
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.1e-29 131.3 80 77.5
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 9.1e-29 130.2 80 76.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 2.0e-28 129.0 79 77.2
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.7e-28 128.6 77 77.9
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 5.9e-28 127.5 92 64.1
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.7e-27 125.9 90 64.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.3e-27 125.6 95 68.4
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 6.5e-27 124.0 94 62.8
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.5e-26 120.9 91 61.5
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 8.9e-24 113.6 98 53.1
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 5.7e-23 110.9 82 65.9
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 2.8e-22 108.6 74 68.9
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.3e-22 107.5 77 67.5
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 2.4e-21 105.5 87 55.2
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.1e-21 105.1 81 63.0
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 4.5e-20 101.3 71 69.0
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.9e-18 95.9 56 76.8
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 3.3e-18 95.1 58 72.4
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 4.7e-17 91.3 74 55.4
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 2.3e-16 89.0 55 70.9
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 1.2e-12 76.6 46 78.3
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-12 76.6 52 65.4
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 2.3e-08 62.4 53 58.5
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 6.8e-08 60.8 45 57.8


User provided reference genes

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