Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G194700 Glycine max HOM05D000007 ORTHO05D000017 2.4e-43 178.3 83 100.0
Glyma.09G086500 Glycine max HOM05D000007 ORTHO05D000017 8.5e-09 63.5 80 47.5
Glyma.06G197000 Glycine max HOM05D000007 ORTHO05D000017 1.9e-08 62.4 90 47.8
Lj1g0023827 Lotus japonicus HOM05D000007 ORTHO05D000017 4.2e-08 61.2 91 40.7
Glyma.08G252000 Glycine max HOM05D000007 ORTHO05D000017 7.2e-08 60.5 84 39.3
Medtr5g097210 Medicago truncatula HOM05D000007 ORTHO05D000017 9.4e-08 60.1 88 42.0
Glyma.16G202900 Glycine max HOM05D000007 ORTHO05D000017 1.2e-07 59.7 93 39.8
Glyma.18G274800 Glycine max HOM05D000007 ORTHO05D000017 1.6e-07 59.3 90 40.0
Medtr4g109280 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-07 59.3 84 41.7
Medtr6g060650 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-07 59.3 88 39.8
Glyma.01G232700 Glycine max HOM05D000007 ORTHO05D000017 2.7e-07 58.5 94 42.6
Glyma.05G142101 Glycine max HOM05D000007 ORTHO05D000017 2.7e-07 58.5 91 39.6
arahy.Tifrunner.gnm1.ann1.P429WZ Arachis hypogaea HOM05D000007 ORTHO05D000017 3.6e-07 58.2 84 40.5
Glyma.08G098000 Glycine max HOM05D000007 ORTHO05D000017 3.6e-07 58.2 89 40.4
Glyma.16G203000 Glycine max HOM05D000007 ORTHO05D000017 3.6e-07 58.2 91 38.5
Medtr4g094365 Medicago truncatula HOM05D000007 ORTHO05D000017 8.0e-07 57.0 90 38.9
Glyma.07G247000 Glycine max HOM05D000007 ORTHO05D000017 1.0e-06 56.6 86 38.4
Glyma.17G162200 Glycine max HOM05D000007 ORTHO05D000017 1.0e-06 56.6 87 41.4
Lj5g0014558 Lotus japonicus HOM05D000007 ORTHO05D000017 1.0e-06 56.6 88 35.2
Medtr4g117720 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-06 56.6 93 38.7
Psat4g061880 Pisum sativum HOM05D000007 ORTHO05D000017 1.4e-06 56.2 86 39.5
VMungo1383G2610 Vigna mungo HOM05D000007 ORTHO05D000017 1.4e-06 56.2 106 34.9
Glyma.06G197200 Glycine max HOM05D000007 ORTHO05D000017 1.8e-06 55.8 89 39.3
Glyma.16G202600 Glycine max HOM05D000007 ORTHO05D000017 1.8e-06 55.8 99 37.4
Glyma.16G202800 Glycine max HOM05D000007 ORTHO05D000017 1.8e-06 55.8 91 40.7
Glyma.08G251600 Glycine max HOM05D000007 ORTHO05D000017 2.3e-06 55.5 91 38.5
Glyma.10G132100 Glycine max HOM05D000007 ORTHO05D000017 3.0e-06 55.1 89 41.6
Glyma.20G073200 Glycine max HOM05D000007 ORTHO05D000017 3.0e-06 55.1 94 42.6
Medtr1g055165 Medicago truncatula HOM05D000007 ORTHO05D000017 3.0e-06 55.1 89 37.1
Medtr1g055175 Medicago truncatula HOM05D000007 ORTHO05D000017 3.0e-06 55.1 89 37.1
VMungo1309G0382 Vigna mungo HOM05D000007 ORTHO05D000017 3.0e-06 55.1 89 33.7
Glyma.06G197100 Glycine max HOM05D000007 ORTHO05D000017 4.0e-06 54.7 87 39.1
Medtr4g118380 Medicago truncatula HOM05D000007 ORTHO05D000017 4.0e-06 54.7 96 35.4
Glyma.10G117700 Glycine max HOM05D000007 ORTHO05D000017 5.2e-06 54.3 86 39.5
VMungo1215G3363 Vigna mungo HOM05D000007 ORTHO05D000017 5.2e-06 54.3 86 36.0
Glyma.07G187200 Glycine max HOM05D000007 ORTHO05D000017 6.8e-06 53.9 74 45.9
arahy.Tifrunner.gnm1.ann1.C63SCF Arachis hypogaea HOM05D000007 ORTHO05D000017 8.8e-06 53.5 85 40.0
arahy.Tifrunner.gnm1.ann1.XP1KY3 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.8e-06 53.5 85 40.0
Lalb_Chr20g0110871 Lupinus albus HOM05D000007 ORTHO05D000017 8.8e-06 53.5 89 33.7
TPR.G25431 Trifolium pratense HOM05D000007 ORTHO05D000017 8.8e-06 53.5 88 34.1
TPR.G33673 Trifolium pratense HOM05D000007 ORTHO05D000017 8.8e-06 53.5 89 31.5


User provided reference genes

Program Settings