Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G194600 Glycine max HOM05D007106 ORTHO05D007770 1.0e-47 193.0 93 100.0
Glyma.04G168400 Glycine max HOM05D007106 ORTHO05D007770 1.2e-40 169.5 93 86.0
Phvul.009G186700 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 1.9e-28 129.0 93 71.0
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 4.3e-25 117.9 95 65.3
Medtr3g435530 Medicago truncatula HOM05D007106 ORTHO05D007770 1.2e-24 116.3 95 62.1
TPR.G11889 Trifolium pratense HOM05D007106 ORTHO05D007770 1.3e-21 106.3 96 59.4
Glyma.05G026000 Glycine max HOM05D007106 ORTHO05D007770 2.4e-20 102.1 90 63.3
Glyma.17G100900 Glycine max HOM05D007106 ORTHO05D007770 7.1e-20 100.5 90 63.3
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 4.6e-19 97.8 85 62.4
Lalb_Chr23g0273781 Lupinus albus HOM05D007106 ORTHO05D007770 1.3e-18 96.3 86 61.6
Lj1g0012300 Lotus japonicus HOM05D007106 ORTHO05D007770 3.0e-18 95.1 93 55.9
Lj4g0015417 Lotus japonicus HOM05D007106 ORTHO05D007770 6.6e-18 94.0 82 61.0
Phvul.003G189400 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 3.3e-17 91.7 91 58.2
TPR.G9262 Trifolium pratense HOM05D007106 ORTHO05D007770 1.1e-15 86.7 87 57.5
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 2.2e-13 79.0 81 49.4
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 3.8e-13 78.2 82 54.9
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 6.4e-13 77.4 91 49.5
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 7.1e-12 73.9 89 50.6
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 1.6e-11 72.8 89 51.7
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 2.7e-11 72.0 83 50.6
Ca_27246_v3 Cicer arietinum L. HOM05D007106 ORTHO05D007770 4.6e-11 71.2 48 68.8
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.0e-10 70.1 91 48.4
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 1.0e-10 70.1 91 48.4
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 1.0e-10 70.1 81 46.9
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 1.0e-10 70.1 81 46.9
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 1.0e-10 70.1 88 47.7
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 1.3e-10 69.7 90 47.8
Nn4g23194 Nelumbo nucifera HOM05D007106 ORTHO05D007770 1.3e-10 69.7 93 47.3
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 2.3e-10 68.9 91 48.4
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 6.6e-10 67.4 90 46.7
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 8.7e-10 67.0 91 42.9
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 2.5e-09 65.5 89 48.3
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 3.3e-09 65.1 89 46.1
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 3.3e-09 65.1 89 46.1
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 4.3e-09 64.7 83 45.8
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 5.6e-09 64.3 83 48.2
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 5.6e-09 64.3 83 48.2
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 5.6e-09 64.3 89 46.1
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 7.3e-09 63.9 90 48.9
TAR622G1352 Trochodendron aralioides HOM05D007106 ORTHO05D007770 7.3e-09 63.9 82 46.3
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.3e-08 63.2 89 42.7
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.3e-08 63.2 89 42.7
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 1.3e-08 63.2 95 41.1
arahy.Tifrunner.gnm1.ann1.FXK9PR Arachis hypogaea HOM05D048006 ORTHO05D007770 1.6e-08 62.8 112 44.6
arahy.Tifrunner.gnm1.ann1.Y9A4XN Arachis hypogaea HOM05D007106 ORTHO05D007770 1.6e-08 62.8 83 48.2
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.6e-08 62.8 89 43.8
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 3.6e-08 61.6 92 44.6
arahy.Tifrunner.gnm1.ann1.9K0L0T Arachis hypogaea HOM05D048006 ORTHO05D007770 1.4e-07 59.7 97 45.4
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 1.4e-07 59.7 87 40.2
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.8e-07 59.3 82 43.9
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.8e-07 59.3 89 43.8
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 1.8e-07 59.3 81 40.7
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 2.4e-07 58.9 91 39.6
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 2.4e-07 58.9 92 44.6
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 3.1e-07 58.5 81 43.2
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 3.1e-07 58.5 90 43.3
Haze_07318 Corylus avellana HOM05D007106 ORTHO05D007770 5.3e-07 57.8 50 58.0
Medtr6g027480 Medicago truncatula HOM05D007691 ORTHO05D008758 5.3e-07 57.8 85 38.8
arahy.Tifrunner.gnm1.ann1.DL456K Arachis hypogaea HOM05D007106 ORTHO05D007770 6.9e-07 57.4 83 47.0
Medtr4g108700 Medicago truncatula HOM05D007106 ORTHO05D007770 6.9e-07 57.4 63 52.4
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 9.0e-07 57.0 93 38.7
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 9.0e-07 57.0 87 40.2
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 9.0e-07 57.0 91 42.9
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 1.2e-06 56.6 87 39.1
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.5e-06 56.2 89 39.3
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 2.0e-06 55.8 82 45.1
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 2.6e-06 55.5 84 40.5
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 3.4e-06 55.1 89 41.6
TAR371G0193 Trochodendron aralioides HOM05D007106 ORTHO05D007770 3.4e-06 55.1 82 42.7
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 5.8e-06 54.3 89 38.2
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 5.8e-06 54.3 95 42.1
EL10Ac5g11028 Beta vulgaris HOM05D007106 ORTHO05D007770 9.9e-06 53.5 91 37.4


User provided reference genes

Program Settings