Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 6.1e-146 520.8 261 100.0
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 5.8e-136 487.6 261 93.1
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 4.0e-121 438.3 256 86.7
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 1.1e-118 430.3 258 85.7
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 2.3e-108 396.0 269 76.2
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 3.1e-105 385.6 244 78.3
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 4.9e-103 378.3 243 77.4
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 2.7e-101 372.5 252 73.4
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 5.6e-99 364.8 237 77.2
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 8.1e-98 360.9 236 77.1
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 8.1e-98 360.9 248 73.4
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 1.2e-96 357.1 272 69.5
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 2.6e-96 355.9 243 72.4
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 5.8e-96 354.8 253 71.9
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 5.8e-96 354.8 216 80.1
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.8e-95 352.1 267 69.3
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 2.5e-94 349.4 243 72.4
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.2e-94 349.0 268 67.5
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 7.1e-94 347.8 252 70.2
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 9.3e-94 347.4 266 67.7
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 1.6e-93 346.7 239 73.2
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 2.1e-93 346.3 243 71.2
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 4.6e-93 345.1 252 69.4
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 4.6e-93 345.1 237 71.3
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 7.9e-93 344.4 244 71.3
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 1.1e-91 340.5 241 70.5
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.1e-91 340.5 243 70.4
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 1.9e-91 339.7 246 69.9
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 2.5e-91 339.3 199 82.4
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.6e-90 336.7 238 70.2
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 1.8e-89 333.2 278 62.6
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 3.1e-89 332.4 241 70.5
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 5.3e-89 331.6 241 70.5
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 5.3e-89 331.6 274 63.1
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 4.5e-88 328.6 250 66.4
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 5.9e-88 328.2 239 67.4
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 5.9e-88 328.2 230 70.4
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 7.6e-88 327.8 237 66.2
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 3.8e-87 325.5 265 63.0
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 6.5e-87 324.7 239 67.4
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 6.5e-87 324.7 237 64.6
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 6.5e-87 324.7 252 66.3
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 1.4e-86 323.6 234 65.4
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 1.4e-86 323.6 234 68.8
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 5.5e-86 321.6 237 64.1
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 5.5e-86 321.6 244 66.4
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 5.5e-86 321.6 234 67.9
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 7.2e-86 321.2 237 67.5
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 9.3e-86 320.9 234 67.5
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 2.1e-85 319.7 256 64.5
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 2.7e-85 319.3 244 65.6
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 4.6e-85 318.5 239 66.5
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 4.6e-85 318.5 227 68.3
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 6.1e-85 318.2 236 64.8
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 6.1e-85 318.2 236 64.8
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 1.3e-84 317.0 222 70.7
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.8e-84 316.6 226 69.0
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 2.3e-84 316.2 228 68.0
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 3.0e-84 315.8 227 68.3
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 3.9e-84 315.5 238 63.4
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 5.1e-84 315.1 231 66.7
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 6.7e-84 314.7 239 63.2
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 1.1e-83 313.9 236 66.5
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 1.1e-83 313.9 235 66.8
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 1.5e-83 313.5 236 66.5
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 1.5e-83 313.5 235 66.4
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.9e-83 313.2 226 69.0
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 3.3e-83 312.4 282 57.8
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 7.4e-83 311.2 221 69.7
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 9.7e-83 310.8 226 67.7
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 1.3e-82 310.5 240 65.0
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 1.6e-82 310.1 246 61.0
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 2.8e-82 309.3 253 64.8
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 4.8e-82 308.5 224 67.9
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 8.2e-82 307.8 231 67.5
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 1.1e-81 307.4 240 65.8
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 1.4e-81 307.0 273 58.6
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 2.4e-81 306.2 238 64.7
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 3.1e-81 305.8 232 65.1
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 4.1e-81 305.4 250 61.2
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 5.3e-81 305.1 246 64.6
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 5.3e-81 305.1 250 60.8
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 6.9e-81 304.7 221 68.8
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 9.0e-81 304.3 248 62.5
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 3.8e-79 298.9 234 65.8
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 5.0e-79 298.5 234 63.7
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.1e-78 297.4 238 62.2
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 1.4e-78 297.0 234 64.5
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 1.6e-77 293.5 223 64.1
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.1e-77 293.1 223 64.1
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 2.7e-77 292.7 231 63.2
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.7e-77 292.7 223 63.7
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 3.0e-76 289.3 244 61.1
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 3.9e-76 288.9 217 63.6
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 1.1e-75 287.3 227 62.1
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 2.5e-75 286.2 235 62.1
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 4.3e-75 285.4 241 60.6
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 4.3e-75 285.4 222 63.1
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 7.4e-75 284.6 250 60.0
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 7.4e-75 284.6 240 60.0
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 7.4e-75 284.6 235 62.1
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 2.2e-74 283.1 237 62.9
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 2.2e-74 283.1 234 62.4
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 6.3e-74 281.6 219 63.0
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 3.1e-73 279.3 229 61.6
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 4.1e-73 278.9 243 58.4
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 1.2e-72 277.3 242 58.3
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 4.5e-72 275.4 244 59.4
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.8e-71 272.3 255 55.3
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 8.5e-71 271.2 201 67.7
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 2.5e-70 269.6 214 64.5
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 4.2e-70 268.9 265 55.5
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 4.2e-70 268.9 197 69.0
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 1.6e-69 266.9 213 62.9
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 7.9e-69 264.6 144 87.5
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 1.6e-64 250.4 215 56.7
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 1.6e-64 250.4 243 56.0
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 1.7e-63 246.9 181 68.0
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 8.5e-63 244.6 229 55.5
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.1e-62 244.2 268 50.7
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 7.2e-62 241.5 229 57.6
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 4.7e-61 238.8 224 53.6
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 6.1e-61 238.4 182 62.6
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 1.4e-60 237.3 227 50.7
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 5.2e-60 235.3 242 52.5
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.5e-59 233.8 158 73.4
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.5e-59 233.8 145 78.6
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 8.2e-58 228.0 301 44.2
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 1.1e-57 227.6 148 75.0
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 9.1e-57 224.6 231 54.5
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 2.9e-55 219.5 173 63.0
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 3.7e-50 202.6 222 51.4
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 1.2e-48 197.6 146 67.1
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 3.8e-47 192.6 226 45.6
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.2e-45 187.6 162 58.6
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 1.2e-45 187.6 174 52.9
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 2.6e-43 179.9 166 53.0
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.1e-41 174.5 143 60.1
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 1.1e-38 164.5 136 61.8
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 4.4e-35 152.5 94 77.7
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 5.4e-33 145.6 208 40.9
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 6.6e-31 138.7 124 56.5
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 4.0e-28 129.4 96 67.7
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 6.8e-28 128.6 85 72.9
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 3.7e-26 122.9 239 35.6
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 2.4e-25 120.2 241 34.9
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.0e-23 114.8 112 51.8
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 3.0e-23 113.2 97 55.7
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 4.4e-19 99.4 79 58.2
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 5.2e-12 75.9 93 43.0
Cfa021669 Carpinus fangiana HOM05D004983 ORTHO05D005847 1.9e-06 57.4 182 26.9


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