Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 0.0e+00 1279.6 648 100.0
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 1.2e-310 1069.3 649 83.5
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 2.3e-295 1018.5 649 80.4
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 1.3e-285 986.1 650 77.4
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 2.5e-281 971.8 652 76.1
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 1.8e-263 912.5 554 82.1
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 2.4e-244 849.0 559 78.0
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 4.2e-212 741.9 668 60.6
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 9.4e-212 740.7 652 60.1
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 4.7e-211 738.4 652 59.8
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.8e-210 736.5 652 59.7
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 3.9e-210 735.3 656 59.6
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 2.2e-208 729.6 659 59.5
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 3.8e-205 718.8 653 59.0
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.1e-204 717.2 652 58.4
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.5e-204 716.8 673 61.1
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 9.4e-204 714.1 651 57.5
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 3.6e-203 712.2 656 57.5
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 1.3e-200 703.7 662 55.4
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 8.2e-200 701.0 664 57.8
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.1e-199 700.7 593 62.4
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 7.0e-199 698.0 660 56.5
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 3.8e-197 692.2 654 56.3
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 9.4e-196 687.6 595 61.2
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 3.0e-194 682.6 662 56.5
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 5.7e-193 678.3 662 55.7
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 7.0e-191 671.4 659 56.6
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 4.5e-190 668.7 681 53.5
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 1.1e-188 664.1 674 53.3
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 1.9e-188 663.3 649 55.6
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 2.1e-187 659.8 665 54.1
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 1.8e-186 656.8 616 57.6
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 6.8e-186 654.8 652 55.1
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 7.5e-185 651.4 700 53.3
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 1.7e-181 640.2 662 53.9
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 6.6e-181 638.3 660 52.9
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 8.6e-181 637.9 712 52.4
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 2.1e-179 633.3 677 51.7
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 1.2e-177 627.5 655 51.8
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 1.5e-177 627.1 608 56.4
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.1e-175 620.9 668 50.3
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 2.4e-175 619.8 649 52.1
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 1.2e-174 617.5 656 51.2
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 2.7e-174 616.3 648 52.2
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 4.6e-174 615.5 647 52.4
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 5.9e-174 615.1 677 50.8
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 5.9e-174 615.1 662 50.6
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 1.9e-172 610.1 680 49.9
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 2.5e-172 609.8 647 51.6
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 4.3e-172 609.0 655 49.6
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 4.3e-172 609.0 655 49.6
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 9.5e-172 607.8 655 49.6
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 4.7e-171 605.5 664 50.0
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 6.2e-171 605.1 656 50.5
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 6.2e-171 605.1 655 49.9
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 8.0e-171 604.7 666 49.7
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.8e-170 603.6 652 49.4
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 2.3e-170 603.2 660 50.9
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 3.1e-170 602.8 663 51.4
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 4.4e-169 599.0 646 49.8
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 9.8e-169 597.8 630 50.8
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 2.2e-168 596.7 635 52.3
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 7.0e-167 591.7 496 62.7
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 3.5e-166 589.3 654 51.1
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 1.3e-165 587.4 656 49.2
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 2.8e-163 579.7 653 51.6
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 6.2e-163 578.6 580 54.5
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 1.4e-162 577.4 877 44.2
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.5e-161 573.9 661 49.5
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 4.4e-161 572.4 777 44.8
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 7.5e-161 571.6 664 49.1
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 1.3e-160 570.9 778 43.4
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 7.3e-156 555.1 662 47.9
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 7.3e-156 555.1 647 48.4
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 9.5e-156 554.7 681 46.1
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.5e-148 530.0 656 47.6
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 9.6e-148 528.1 670 44.9
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 1.1e-146 524.6 584 52.4
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 6.2e-139 498.8 592 50.2
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 6.4e-136 488.8 658 44.7
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 6.9e-130 468.8 667 40.5
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 2.4e-127 460.3 498 50.6
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 3.5e-126 456.4 566 44.5
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 5.3e-122 442.6 449 52.6
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 3.9e-117 426.4 673 38.6
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 1.4e-101 374.8 597 37.5
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 1.8e-101 374.4 405 50.4
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 2.9e-96 357.1 651 35.0
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 5.3e-90 336.3 300 57.0
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.0e-84 317.8 460 45.0
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 6.3e-83 312.8 362 49.4
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 1.7e-80 304.7 311 50.8
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 2.2e-67 261.2 602 32.2
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 8.3e-67 259.2 506 34.2
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 3.2e-58 230.7 308 41.6
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 1.9e-47 194.9 168 60.1
Cpa.g.sc363.3 Carica papaya HOM05D000087 ORTHO05D005735 3.6e-46 190.7 169 59.8
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 3.1e-45 187.6 236 48.7
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.7e-43 181.8 246 45.1
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 1.1e-39 169.1 419 27.2
VMungo0145G0001 Vigna mungo HOM05D000087 ORTHO05D005735 3.2e-34 151.0 94 84.0
VMungo1080G1218 Vigna mungo HOM05D000087 ORTHO05D005735 1.2e-33 149.1 107 74.8
Medtr3g080660 Medicago truncatula HOM05D000087 ORTHO05D005735 7.8e-33 146.4 95 80.0
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.6e-30 138.7 123 53.7
FAN13G3301 Fragaria x ananassa HOM05D000087 ORTHO05D005735 5.3e-29 133.7 134 50.0
HPP92_028197 Vanilla planifolia HOM05D000087 ORTHO05D005735 1.2e-28 132.5 172 44.2
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 3.4e-28 131.0 132 51.5
Cre03.g166600 Chlamydomonas reinhardtii HOM05D000087 ORTHO05D005735 1.3e-22 112.5 529 23.4
Oeu053260.1 Olea europaea HOM05D000087 ORTHO05D010194 3.6e-22 110.9 123 50.4
SEGI_26992 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 2.2e-19 101.7 168 36.9
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 6.0e-17 93.6 59 78.0
CARHR291390 Cardamine hirsuta HOM05D000087 ORTHO05D005735 7.9e-17 93.2 68 63.2
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 3.3e-15 87.8 389 26.5
Duzib084G0615 Durio zibethinus HOM05D000087 ORTHO05D005735 5.6e-15 87.0 94 48.9
CSS0050207 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 3.4e-12 77.8 90 47.8
Rhsim02G0255800 Rhododendron simsii HOM05D000087 ORTHO05D005735 5.8e-12 77.0 94 45.7
SEGI_26704 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 1.3e-11 75.9 81 42.0
Hma1.2p1_0198F.1_g085360 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 6.4e-11 73.6 90 46.7
CSS0033050 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 3.2e-10 71.2 75 48.0
CSS0029196 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 2.7e-09 68.2 62 51.6
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 3.5e-09 67.8 58 55.2
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 5.1e-08 63.9 62 48.4
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 6.7e-08 63.5 72 45.8
CSS0049190 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 7.4e-07 60.1 87 43.7
SalBow1G5284 Salvia bowleyana HOM05D000087 ORTHO05D005735 2.1e-06 58.5 64 53.1


User provided reference genes

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