Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 5.1e-214 747.7 432 100.0
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 7.5e-165 584.3 410 88.3
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 2.2e-164 582.8 410 81.0
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 8.6e-161 570.9 411 80.5
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 2.1e-159 566.2 410 76.3
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 1.0e-158 563.9 411 76.4
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.3e-156 557.0 410 76.1
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 5.2e-150 535.0 409 75.8
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 4.4e-149 531.9 410 71.7
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 4.1e-147 525.4 410 74.6
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.2e-146 523.9 427 78.7
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 4.6e-146 521.9 412 69.4
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.3e-145 520.4 412 68.2
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 2.3e-145 519.6 414 69.8
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 3.0e-145 519.2 428 76.2
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 5.1e-145 518.5 410 68.3
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.1e-144 517.3 410 68.0
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 4.7e-143 511.9 416 71.2
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 4.7e-143 511.9 413 71.9
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 6.2e-143 511.5 412 72.6
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.6e-141 506.1 428 69.6
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 5.8e-141 505.0 403 68.0
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 9.9e-141 504.2 418 71.5
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.4e-139 500.4 411 72.5
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 2.4e-139 499.6 397 71.5
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 5.4e-139 498.4 405 72.3
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 7.1e-139 498.0 406 72.4
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 2.1e-138 496.5 414 74.9
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 4.6e-138 495.4 412 71.8
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.0e-137 492.7 424 72.9
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 6.6e-137 491.5 411 68.1
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 1.1e-136 490.7 423 68.1
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.1e-136 490.7 424 71.5
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.5e-136 490.3 399 74.7
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 2.5e-136 489.6 416 71.4
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 5.6e-136 488.4 414 73.2
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 9.5e-136 487.6 420 72.9
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.2e-135 487.3 418 72.0
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 1.2e-135 487.3 416 69.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 6.2e-135 485.0 422 68.7
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 6.2e-135 485.0 409 71.1
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 1.1e-134 484.2 423 64.5
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.8e-134 483.4 423 69.3
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 3.1e-134 482.6 415 68.9
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 4.0e-134 482.3 410 69.8
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 4.0e-134 482.3 412 71.4
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.2e-133 480.7 424 74.1
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.2e-133 480.7 393 72.3
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 4.4e-133 478.8 415 70.6
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 3.8e-132 475.7 420 74.5
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 3.8e-132 475.7 394 69.3
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.4e-131 473.8 399 62.7
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 1.2e-130 470.7 422 60.4
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 4.6e-130 468.8 399 61.9
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 4.6e-130 468.8 412 71.8
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 4.6e-130 468.8 455 58.0
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.3e-129 467.2 410 64.9
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.3e-129 467.2 414 67.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 5.1e-129 465.3 412 72.6
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 6.6e-129 464.9 427 67.2
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 8.7e-129 464.5 433 60.7
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.1e-128 464.2 410 67.6
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.1e-128 464.2 412 67.5
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.3e-127 460.7 398 72.1
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-127 460.3 411 67.9
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 2.8e-127 459.5 369 79.4
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.8e-127 459.5 411 67.9
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.8e-127 458.8 413 67.8
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 6.2e-127 458.4 414 66.9
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 6.2e-127 458.4 414 66.9
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 2.4e-126 456.4 420 69.5
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 6.9e-126 454.9 408 72.8
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.5e-125 453.8 420 65.7
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.5e-125 453.8 420 65.7
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-125 453.8 411 66.4
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 1.5e-125 453.8 421 65.3
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.0e-125 453.4 415 70.6
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 5.8e-125 451.8 452 60.0
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 7.6e-125 451.4 405 61.2
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 3.2e-123 446.0 408 71.6
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 3.2e-123 446.0 408 71.6
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 5.4e-123 445.3 411 69.1
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 9.3e-123 444.5 413 68.5
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 2.1e-122 443.4 365 72.9
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 3.5e-122 442.6 344 74.4
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 4.6e-122 442.2 410 67.6
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 4.6e-122 442.2 411 70.8
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 7.8e-122 441.4 382 70.7
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.3e-121 440.7 415 62.7
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 1.7e-121 440.3 412 71.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 5.1e-121 438.7 417 67.9
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 6.6e-121 438.3 362 76.0
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.1e-120 437.6 474 62.7
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.9e-120 436.8 415 70.4
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 4.3e-120 435.6 395 60.8
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.1e-118 431.0 365 64.4
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.4e-118 429.9 414 62.3
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 2.4e-118 429.9 379 63.1
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 3.2e-115 419.5 339 64.0
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 2.3e-113 413.3 399 56.9
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 3.0e-113 412.9 374 62.3
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.3e-112 409.5 410 54.9
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 4.8e-111 405.6 415 63.1
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 3.1e-110 402.9 405 61.7
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 1.3e-108 397.5 424 57.8
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.3e-108 397.5 428 57.5
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 2.9e-108 396.4 343 61.2
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.9e-108 395.6 415 57.6
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.4e-108 394.8 411 56.2
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.4e-107 394.0 411 55.7
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-107 394.0 411 55.0
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 9.3e-107 391.3 325 65.2
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.7e-106 389.8 430 55.3
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 3.5e-106 389.4 298 71.8
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.9e-100 369.8 414 56.0
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 6.3e-95 352.1 440 50.2
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 3.4e-93 346.3 356 60.7
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.4e-93 346.3 389 48.6
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.5e-91 340.1 360 54.7
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 7.9e-90 335.1 393 51.4
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 8.8e-89 331.6 177 88.1
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 8.2e-87 325.1 329 52.3
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 4.1e-86 322.8 349 49.3
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.9e-81 306.2 342 48.8
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 8.8e-81 305.1 180 79.4
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.1e-80 304.7 372 51.6
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 3.1e-78 296.6 296 66.6
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 6.5e-76 288.9 290 63.8
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.5e-75 287.7 318 49.7
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 3.2e-75 286.6 138 98.6
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.2e-64 251.5 296 60.1
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 2.7e-58 230.3 120 88.3
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.0e-57 228.4 123 89.4
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.0e-53 214.2 290 50.0
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.4e-46 191.4 113 73.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-46 190.7 169 57.4
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 2.4e-46 190.7 97 90.7
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.0e-44 185.3 171 61.4
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.2e-40 171.8 332 35.8
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 9.8e-40 168.7 160 61.2
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 9.2e-30 135.6 267 35.6
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 8.1e-26 122.5 90 71.1
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 3.8e-15 87.0 119 46.2
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.1e-14 85.5 75 52.0


User provided reference genes

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