Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 4.1e-161 571.2 268 100.0
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 3.1e-153 545.0 266 95.9
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 1.0e-148 530.0 261 92.7
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 5.7e-147 524.2 265 89.4
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 1.6e-144 516.2 265 89.8
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 3.8e-143 511.5 263 87.8
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 4.7e-141 504.6 264 87.5
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 4.7e-141 504.6 264 87.5
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 4.1e-137 491.5 265 83.8
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 1.6e-136 489.6 263 83.7
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.6e-136 489.6 265 83.4
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 1.9e-134 482.6 263 84.0
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 5.5e-134 481.1 265 83.0
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 3.6e-133 478.4 264 83.0
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 4.7e-133 478.0 261 82.4
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 4.7e-133 478.0 267 82.0
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.4e-132 476.5 265 81.5
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 4.0e-132 474.9 263 81.4
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 4.0e-132 474.9 265 82.3
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.5e-131 473.0 265 80.4
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 1.5e-131 473.0 255 84.3
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.8e-130 468.8 266 80.1
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 3.7e-130 468.4 270 80.7
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 4.9e-130 468.0 264 79.9
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 1.1e-129 466.8 256 82.4
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 5.4e-129 464.5 265 81.5
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 9.2e-129 463.8 264 79.5
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.6e-128 463.0 259 80.7
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 2.7e-128 462.2 264 79.2
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 2.7e-128 462.2 253 81.8
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 4.5e-128 461.5 253 81.8
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 7.8e-128 460.7 260 78.5
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 1.0e-127 460.3 265 79.6
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.0e-127 460.3 268 79.5
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 1.7e-127 459.5 270 79.3
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 2.9e-127 458.8 265 79.2
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 5.0e-127 458.0 267 79.0
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 6.6e-127 457.6 261 79.7
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 6.6e-127 457.6 264 79.5
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 1.5e-126 456.4 266 78.2
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 1.9e-126 456.1 259 80.3
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 1.9e-126 456.1 264 79.2
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 3.3e-126 455.3 253 81.4
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 4.3e-126 454.9 265 77.4
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 4.3e-126 454.9 262 78.6
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 5.6e-126 454.5 266 77.8
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 1.2e-125 453.4 268 78.7
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 2.8e-125 452.2 264 78.0
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 1.0e-124 450.3 266 75.9
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 1.0e-124 450.3 262 79.4
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 1.8e-124 449.5 266 75.9
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 2.3e-124 449.1 266 75.6
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 2.3e-124 449.1 264 78.8
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 3.0e-124 448.7 266 75.6
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 5.2e-124 448.0 262 79.4
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 6.8e-124 447.6 252 80.6
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 8.9e-124 447.2 267 79.0
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 1.5e-123 446.4 264 76.5
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 2.0e-123 446.0 262 79.0
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 3.4e-123 445.3 262 78.6
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 4.4e-123 444.9 266 74.8
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 5.8e-123 444.5 256 79.3
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 9.8e-123 443.7 251 80.5
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 1.3e-122 443.4 266 74.8
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 1.3e-122 443.4 263 77.2
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 2.2e-122 442.6 251 80.1
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 2.2e-122 442.6 265 78.9
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 2.9e-122 442.2 262 76.3
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 6.4e-122 441.0 251 80.1
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 6.4e-122 441.0 275 75.3
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 6.4e-122 441.0 273 76.6
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 8.3e-122 440.7 247 80.6
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.1e-121 440.3 263 76.8
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 1.4e-121 439.9 262 76.7
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.4e-121 439.9 256 78.5
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 1.2e-120 436.8 262 77.1
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 2.0e-120 436.0 264 75.0
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 3.5e-120 435.3 257 77.4
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 4.6e-120 434.9 257 77.0
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 6.0e-120 434.5 275 73.1
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 1.0e-119 433.7 261 76.2
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 3.0e-119 432.2 264 73.9
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 8.6e-119 430.6 264 73.5
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 1.6e-117 426.4 264 73.5
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 1.6e-117 426.4 264 73.1
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.6e-117 426.4 249 77.5
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 1.6e-117 426.4 264 72.3
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 6.2e-117 424.5 266 72.6
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 8.0e-117 424.1 235 80.9
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 4.0e-116 421.8 282 68.8
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 8.9e-116 420.6 254 74.4
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 2.0e-115 419.5 260 72.7
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 2.0e-115 419.5 280 69.3
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 2.6e-115 419.1 264 70.8
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 4.4e-115 418.3 265 72.1
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.3e-114 416.8 249 75.9
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 3.2e-113 412.1 267 72.3
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 9.2e-113 410.6 268 73.1
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 1.6e-112 409.8 278 68.3
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 2.1e-112 409.5 269 72.5
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 3.0e-111 405.6 259 73.4
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 5.1e-111 404.8 232 75.0
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 6.6e-111 404.4 289 64.7
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 8.6e-111 404.1 269 72.5
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 8.1e-109 397.5 234 78.2
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.4e-108 396.7 293 66.2
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 1.4e-108 396.7 232 74.6
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 2.3e-108 396.0 209 85.2
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 2.6e-107 392.5 267 68.9
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 1.7e-106 389.8 232 71.6
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 8.3e-106 387.5 192 89.6
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 1.1e-105 387.1 232 76.3
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 1.4e-105 386.7 219 78.5
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 4.3e-102 375.2 222 76.6
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 8.1e-101 370.9 265 66.4
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 3.4e-99 365.5 227 67.4
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 9.9e-99 364.0 246 65.4
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 3.0e-95 352.4 218 67.9
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.1e-94 350.5 222 66.7
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 1.5e-94 350.1 224 66.5
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 9.6e-94 347.4 221 72.9
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 6.2e-93 344.7 299 57.2
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 1.1e-92 344.0 230 70.0
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.3e-87 327.0 329 51.4
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 1.1e-86 323.9 277 59.6
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 2.8e-85 319.3 164 84.8
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 2.1e-80 303.1 201 66.2
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 3.9e-79 298.9 161 83.2
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 5.1e-79 298.5 181 75.7
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 5.6e-78 295.0 215 57.7
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 3.7e-69 265.8 152 78.3
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.1e-68 264.2 162 75.9
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 7.9e-64 248.1 138 79.7
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 2.0e-59 233.4 213 55.9
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 4.5e-59 232.3 206 55.8
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 7.7e-51 204.9 119 76.5
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 1.4e-49 200.7 125 72.8
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 5.0e-34 149.1 105 69.5
Psat3g122800 Pisum sativum HOM05D001551 ORTHO05D005859 2.4e-28 130.2 82 76.8
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 7.0e-28 128.6 82 75.6
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 2.2e-26 123.6 67 76.1
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 1.2e-24 117.9 72 76.4
Psat7g261640 Pisum sativum HOM05D001551 ORTHO05D005859 2.7e-24 116.7 96 67.7
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 4.4e-22 109.4 66 74.2
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 4.4e-22 109.4 65 67.7
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 7.7e-19 98.6 54 77.8
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 1.2e-16 91.3 85 56.5
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 8.0e-16 88.6 61 68.9
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 1.8e-15 87.4 70 61.4
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 5.7e-14 82.4 70 61.4
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 4.9e-13 79.3 43 72.1
Duzib084G0670 Durio zibethinus HOM05D001551 ORTHO05D005859 1.4e-12 77.8 56 62.5
Ah.11g046990 Amaranthus hybridus HOM05D001551 ORTHO05D005859 4.5e-11 72.8 56 60.7
Ah.02g114530 Amaranthus hybridus HOM05D001551 ORTHO05D005859 3.9e-10 69.7 49 67.3
BolC3t14316H Brassica oleracea HOM05D001551 ORTHO05D042173 7.3e-09 65.5 169 27.8
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 8.9e-07 58.5 67 43.3


User provided reference genes

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