Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G154900 Glycine max HOM05D000665 ORTHO05D000140 2.4e-34 148.3 77 100.0
Glyma.03G049000 Glycine max HOM05D000665 ORTHO05D000140 8.2e-14 80.1 75 48.0
Glyma.16G081300 Glycine max HOM05D000665 ORTHO05D000140 1.4e-13 79.3 75 46.7
Glyma.10G096120 Glycine max HOM05D000665 ORTHO05D000140 2.4e-13 78.6 76 47.4
Glyma.02G156600 Glycine max HOM05D000665 ORTHO05D000140 3.1e-13 78.2 75 46.7
Glyma.16G125050 Glycine max HOM05D000665 ORTHO05D000140 1.2e-12 76.3 82 46.3
Glyma.18G141600 Glycine max HOM05D000665 ORTHO05D000140 2.6e-12 75.1 72 47.2
Glyma.13G077400 Glycine max HOM05D000665 ORTHO05D000140 9.4e-10 66.6 56 55.4
Lj1g0005320 Lotus japonicus HOM05D000665 ORTHO05D000140 1.4e-08 62.8 77 42.9
Lj2g0022922 Lotus japonicus HOM05D000665 ORTHO05D000140 1.4e-08 62.8 77 42.9
Lj5g0014380 Lotus japonicus HOM05D000665 ORTHO05D000140 1.4e-08 62.8 77 42.9
Lj5g0012691 Lotus japonicus HOM05D000665 ORTHO05D000140 3.0e-08 61.6 77 41.6
Glyma.05G097200 Glycine max HOM05D000665 ORTHO05D000140 6.7e-08 60.5 52 51.9
Glyma.08G270500 Glycine max HOM05D000665 ORTHO05D000140 2.6e-07 58.5 68 38.2
Lj6g0001109 Lotus japonicus HOM05D000665 ORTHO05D000140 7.4e-07 57.0 77 40.3
Lj1g0011582 Lotus japonicus HOM05D000665 ORTHO05D000140 9.7e-07 56.6 78 39.7
Medtr5g086320 Medicago truncatula HOM05D000665 ORTHO05D000140 2.2e-06 55.5 80 37.5
Medtr7g102860 Medicago truncatula HOM05D000665 ORTHO05D000140 2.2e-06 55.5 76 35.5
COL.COLO4_07541 Corchorus olitorius HOM05D000665 ORTHO05D000140 4.8e-06 54.3 75 36.0


User provided reference genes

Program Settings