Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 1.4e-145 520.0 354 100.0
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 1.9e-118 429.9 354 78.5
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 4.5e-107 392.1 363 70.8
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 2.2e-101 373.2 362 66.0
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 9.4e-97 357.8 364 64.8
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 5.1e-95 352.1 362 66.9
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 5.7e-94 348.6 359 63.5
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 8.2e-93 344.7 367 76.6
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 1.4e-92 344.0 366 65.3
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 2.4e-92 343.2 352 65.9
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 2.4e-92 343.2 354 69.8
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 1.3e-90 337.4 366 62.6
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.9e-89 333.6 363 63.9
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 5.5e-89 332.0 364 61.0
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 9.4e-89 331.3 362 65.5
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 4.7e-88 328.9 353 60.1
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 3.0e-87 326.2 363 57.9
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.6e-86 323.2 368 55.2
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 3.3e-86 322.8 365 66.0
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 5.7e-86 322.0 362 64.1
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 7.4e-86 321.6 362 57.2
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 1.1e-84 317.8 375 65.3
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 5.3e-84 315.5 359 61.3
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 5.3e-84 315.5 366 61.2
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 1.2e-83 314.3 364 61.3
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 4.5e-83 312.4 358 62.3
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 2.2e-82 310.1 366 57.4
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 2.5e-81 306.6 379 61.5
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 4.2e-81 305.8 365 58.4
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 2.1e-80 303.5 378 57.4
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 2.3e-79 300.1 366 56.0
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.1e-78 297.7 370 52.2
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.5e-78 297.4 371 53.9
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 3.3e-78 296.2 367 54.8
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 4.4e-78 295.8 372 62.1
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 5.7e-78 295.4 373 57.4
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 5.7e-78 295.4 369 57.5
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 9.7e-78 294.7 355 56.1
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 2.2e-77 293.5 367 54.8
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 2.8e-77 293.1 364 56.3
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.7e-77 292.7 367 53.4
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 4.8e-77 292.4 362 53.9
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 6.3e-77 292.0 376 56.6
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 8.2e-77 291.6 363 53.7
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 1.4e-76 290.8 364 55.8
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.4e-76 290.0 363 54.0
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 7.0e-76 288.5 357 51.0
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 9.1e-76 288.1 342 56.4
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 1.2e-75 287.7 360 52.2
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 2.0e-75 287.0 363 53.7
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 1.7e-74 283.9 355 54.9
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 2.2e-74 283.5 369 60.4
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 3.8e-74 282.7 357 60.2
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 6.5e-74 282.0 363 49.6
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 7.5e-70 268.5 372 53.5
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 2.8e-69 266.5 356 46.6
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 9.1e-68 261.5 356 52.8
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 1.1e-65 254.6 370 44.1
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 1.2e-64 251.1 382 48.7
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 2.1e-64 250.4 364 55.5
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 3.6e-64 249.6 357 45.9
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 8.0e-64 248.4 359 50.4
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 1.8e-63 247.3 358 49.7
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 3.0e-63 246.5 363 47.1
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 4.0e-63 246.1 270 52.2
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 5.2e-63 245.7 357 56.9
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 4.4e-62 242.7 361 46.3
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 1.7e-61 240.7 357 51.3
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.7e-61 240.7 367 47.4
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 6.3e-61 238.8 361 45.7
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 6.3e-61 238.8 361 45.7
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 6.3e-61 238.8 361 45.7
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 8.3e-61 238.4 361 47.4
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 3.1e-60 236.5 355 45.1
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 4.1e-60 236.1 378 48.9
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 5.4e-60 235.7 358 52.5
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 2.0e-59 233.8 377 48.3
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 3.5e-59 233.0 367 48.8
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 4.5e-59 232.6 352 49.1
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 3.8e-58 229.6 359 45.7
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.5e-57 227.6 324 46.9
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 1.9e-57 227.3 347 47.0
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 1.9e-57 227.3 347 46.4
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 3.3e-57 226.5 284 54.2
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 3.3e-57 226.5 363 55.9
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 7.2e-57 225.3 360 45.0
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 7.2e-57 225.3 355 53.2
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 1.2e-56 224.6 359 50.7
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 2.1e-56 223.8 354 43.2
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 2.8e-56 223.4 336 45.2
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 2.8e-56 223.4 356 46.6
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 3.6e-56 223.0 364 48.1
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 8.0e-56 221.9 322 50.6
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 1.4e-55 221.1 348 47.1
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 6.8e-55 218.8 303 45.9
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.0e-54 217.2 367 44.4
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 4.4e-54 216.1 381 45.7
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 5.7e-54 215.7 359 49.6
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 1.7e-53 214.2 300 64.3
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 3.7e-53 213.0 360 46.7
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 3.7e-53 213.0 362 49.4
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 1.1e-52 211.5 362 46.1
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.4e-52 211.1 359 48.5
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 4.1e-52 209.5 363 44.6
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 4.1e-52 209.5 363 50.7
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 7.0e-52 208.8 361 51.5
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 3.5e-51 206.5 362 46.7
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-49 201.4 360 42.2
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 5.6e-49 199.1 361 41.3
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 7.3e-49 198.7 361 46.3
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 1.6e-48 197.6 291 48.5
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 2.8e-48 196.8 360 41.4
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 2.8e-48 196.8 361 41.8
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 1.0e-47 194.9 367 52.0
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 2.3e-47 193.7 333 49.5
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 3.1e-47 193.4 360 41.4
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 4.0e-47 193.0 360 41.1
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 6.8e-47 192.2 360 41.1
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 8.9e-47 191.8 367 48.8
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 2.0e-46 190.7 367 52.0
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 2.0e-46 190.7 367 52.0
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 2.0e-46 190.7 367 52.0
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 2.6e-46 190.3 350 48.0
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 1.7e-45 187.6 235 54.5
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 1.4e-44 184.5 365 43.3
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 1.9e-44 184.1 350 45.1
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 4.1e-44 183.0 351 49.0
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.2e-43 181.4 357 41.7
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.2e-43 181.4 365 36.4
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 2.0e-43 180.6 363 39.4
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 2.0e-43 180.6 361 40.2
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 3.5e-43 179.9 363 39.4
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 7.8e-43 178.7 362 36.5
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 7.8e-43 178.7 358 47.2
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 2.3e-42 177.2 363 44.4
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 1.1e-41 174.9 253 41.1
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 1.2e-40 171.4 360 40.3
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 4.4e-38 162.9 367 37.9
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 7.5e-38 162.2 363 36.6
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 7.5e-38 162.2 363 36.6
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 7.5e-38 162.2 363 36.6
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 3.7e-37 159.8 362 36.7
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 1.9e-36 157.5 154 50.6
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 4.1e-36 156.4 252 42.1
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 3.5e-35 153.3 363 34.2
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 1.3e-34 151.4 363 33.9
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 5.1e-34 149.4 362 36.2
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 3.3e-33 146.7 327 43.1
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-31 141.7 363 33.1
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 2.3e-31 140.6 360 33.1
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 2.6e-30 137.1 219 40.2
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 2.9e-29 133.7 355 33.8
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 6.4e-29 132.5 375 33.6
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 8.3e-29 132.1 350 32.0
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 5.4e-28 129.4 416 29.1
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 5.4e-28 129.4 351 33.0
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 2.7e-27 127.1 262 35.5
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 3.5e-27 126.7 363 32.0
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 1.3e-26 124.8 263 33.1
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 1.3e-26 124.8 371 35.6
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 8.6e-26 122.1 436 29.4
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 2.9e-21 107.1 368 39.1
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 5.4e-20 102.8 343 32.4
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 9.2e-20 102.1 181 39.2
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 1.0e-18 98.6 178 47.2
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 4.3e-17 93.2 111 57.7
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 9.6e-17 92.0 213 46.5
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 4.7e-16 89.7 352 35.8
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 2.3e-10 70.9 187 33.2
BcaC07g38451 Brassica carinata HOM05D003923 ORTHO05D004553 2.6e-06 57.4 55 50.9
BcaB03g11901 Brassica carinata HOM05D003923 ORTHO05D004553 3.4e-06 57.0 58 53.4
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 4.5e-06 56.6 170 34.1


User provided reference genes

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