Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 1.2e-89 333.2 170 100.0
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 2.7e-73 278.9 183 80.9
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 4.5e-73 278.1 176 83.5
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 1.5e-71 273.1 173 83.8
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 5.2e-69 264.6 171 81.3
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 6.8e-69 264.2 171 80.1
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 7.5e-68 260.8 168 79.8
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 9.8e-68 260.4 179 78.8
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 2.2e-67 259.2 179 77.7
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 3.7e-67 258.5 179 78.2
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 6.3e-67 257.7 166 82.5
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 6.3e-67 257.7 191 73.3
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 1.4e-66 256.5 180 75.0
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 2.4e-66 255.8 164 81.1
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 7.0e-66 254.2 180 75.6
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 1.6e-65 253.1 184 72.3
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 2.0e-65 252.7 180 77.8
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 1.7e-64 249.6 181 72.9
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 1.7e-64 249.6 179 74.9
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 2.5e-63 245.7 175 72.6
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 3.2e-63 245.4 179 73.2
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 9.5e-63 243.8 184 71.2
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.2e-62 243.4 185 72.4
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 2.7e-62 242.3 179 72.1
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 2.7e-62 242.3 177 72.3
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 1.4e-61 240.0 178 73.0
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 1.4e-61 240.0 184 70.1
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 1.4e-61 240.0 174 71.8
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 1.2e-60 236.9 171 74.9
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 2.6e-60 235.7 179 69.8
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 2.6e-60 235.7 180 70.6
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 3.4e-60 235.3 188 71.8
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 4.4e-60 235.0 180 72.2
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 4.4e-60 235.0 176 71.6
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 7.5e-60 234.2 152 80.9
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 7.5e-60 234.2 178 71.3
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 9.8e-60 233.8 161 78.9
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 1.7e-59 233.0 177 69.5
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.2e-59 232.6 182 68.1
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.8e-59 232.3 182 68.7
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 4.9e-59 231.5 179 69.3
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 6.3e-59 231.1 181 69.1
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 8.3e-59 230.7 177 69.5
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 1.4e-58 229.9 178 70.2
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 2.4e-58 229.2 181 68.0
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 2.4e-58 229.2 178 68.5
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 2.4e-58 229.2 178 68.5
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 3.1e-58 228.8 180 68.3
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 3.1e-58 228.8 185 66.5
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 7.0e-58 227.6 177 68.4
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 7.0e-58 227.6 182 67.0
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 1.6e-57 226.5 182 67.0
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 1.6e-57 226.5 193 64.8
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 3.5e-57 225.3 190 63.2
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 4.5e-57 224.9 182 65.9
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 4.5e-57 224.9 170 71.8
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 4.5e-57 224.9 170 68.8
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 5.9e-57 224.6 181 66.9
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 5.9e-57 224.6 170 71.2
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 7.7e-57 224.2 182 68.1
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 7.7e-57 224.2 168 72.0
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 7.7e-57 224.2 179 67.0
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 1.0e-56 223.8 167 70.1
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 2.3e-56 222.6 182 67.6
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 2.9e-56 222.2 165 71.5
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 2.9e-56 222.2 184 71.7
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 5.0e-56 221.5 181 67.4
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 5.0e-56 221.5 202 61.9
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 5.0e-56 221.5 179 66.5
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 6.6e-56 221.1 184 64.7
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 6.6e-56 221.1 176 67.0
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.5e-55 219.9 179 65.9
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 1.5e-55 219.9 173 70.5
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 1.9e-55 219.5 174 68.4
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 3.3e-55 218.8 184 64.1
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.3e-55 218.4 179 65.9
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 7.3e-55 217.6 171 70.2
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 1.6e-54 216.5 171 69.0
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 2.1e-54 216.1 168 68.5
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 2.1e-54 216.1 178 66.3
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 2.1e-54 216.1 176 68.8
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 3.6e-54 215.3 177 67.2
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 4.7e-54 214.9 158 69.0
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 8.0e-54 214.2 179 65.4
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 2.0e-52 209.5 235 55.3
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.6e-52 209.1 130 80.8
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 4.4e-52 208.4 196 62.8
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 9.8e-52 207.2 178 64.0
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 1.7e-51 206.5 175 65.7
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.7e-51 206.5 161 68.9
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 4.9e-51 204.9 179 64.2
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 6.4e-51 204.5 171 64.9
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.4e-50 203.4 166 69.3
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 3.2e-50 202.2 137 78.8
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 4.1e-50 201.8 137 78.8
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 4.1e-50 201.8 179 63.1
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 4.6e-49 198.4 168 63.7
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 7.8e-49 197.6 113 84.1
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 3.0e-48 195.7 113 83.2
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 3.9e-48 195.3 112 83.0
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 2.5e-47 192.6 113 81.4
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 5.6e-47 191.4 112 81.2
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 7.3e-47 191.0 113 79.6
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.0e-45 185.3 176 60.2
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 5.2e-45 184.9 118 78.0
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.3e-43 180.3 178 59.0
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.9e-43 179.1 139 66.2
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.6e-41 173.3 170 60.6
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 1.7e-40 169.9 128 75.0
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 8.1e-38 161.0 92 83.7
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 6.8e-37 157.9 92 82.6
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 2.0e-36 156.4 92 85.9
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 9.8e-36 154.1 154 55.8
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 6.4e-35 151.4 110 65.5
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 8.3e-35 151.0 134 56.0
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 7.1e-34 147.9 92 80.4
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.2e-30 137.1 123 63.4
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.3e-29 132.9 90 70.0
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 5.2e-29 131.7 101 59.4
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 5.2e-29 131.7 100 60.0
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 2.2e-27 126.3 70 82.9
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 4.9e-27 125.2 97 58.8
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 8.4e-27 124.4 97 58.8
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 1.7e-24 116.7 70 74.3
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 3.9e-24 115.5 115 54.8
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 1.9e-23 113.2 127 47.2
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 2.2e-19 99.8 92 56.5
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.3e-08 63.2 85 35.3


User provided reference genes

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