Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 3.6e-211 738.0 380 100.0
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 4.1e-159 565.1 378 78.6
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.4e-138 496.9 387 68.0
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 2.0e-137 493.0 379 71.0
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 1.5e-132 476.9 385 68.1
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.2e-129 467.2 384 65.9
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 3.2e-127 459.1 382 64.4
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 1.6e-123 446.8 373 67.6
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 1.0e-109 401.0 331 65.9
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 2.4e-98 363.2 257 75.5
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 8.8e-93 344.7 394 49.2
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.7e-91 340.5 402 47.8
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 6.3e-91 338.6 390 49.7
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 6.5e-88 328.6 215 79.5
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 2.8e-75 286.6 267 59.6
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.1e-74 284.6 267 59.2
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 4.1e-74 282.7 263 59.3
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 9.1e-74 281.6 267 58.8
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.0e-73 280.4 256 59.0
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.0e-72 278.1 256 58.6
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.3e-72 277.7 288 54.9
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 6.6e-72 275.4 399 41.9
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.1e-71 274.6 283 51.9
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.5e-71 274.2 253 59.7
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 4.2e-71 272.7 256 57.8
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 8.0e-70 268.5 272 56.2
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.0e-69 268.1 253 58.1
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.3e-69 266.9 283 53.7
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.3e-69 266.9 250 58.0
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 5.2e-69 265.8 282 53.9
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 8.3e-67 258.5 267 53.2
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 5.4e-66 255.8 381 40.9
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 9.2e-66 255.0 257 54.1
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 7.8e-65 251.9 269 52.8
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 1.0e-64 251.5 272 50.4
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 1.5e-63 247.7 280 50.7
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.5e-63 247.7 266 52.3
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.9e-63 247.3 234 58.5
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 7.3e-63 245.4 286 49.3
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 9.5e-63 245.0 262 51.9
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 1.2e-62 244.6 239 57.3
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 1.2e-62 244.6 317 45.7
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 1.6e-62 244.2 242 57.4
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.1e-62 243.8 321 44.2
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 2.8e-62 243.4 381 39.6
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.4e-61 241.1 248 54.0
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 3.1e-61 240.0 267 52.8
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 3.1e-61 240.0 267 52.8
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 4.0e-61 239.6 332 46.4
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 6.8e-61 238.8 224 58.0
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.0e-60 237.3 251 51.4
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.6e-60 236.9 506 32.6
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 2.6e-60 236.9 266 51.1
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 3.4e-60 236.5 267 51.3
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 3.4e-60 236.5 262 50.8
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 3.4e-60 236.5 296 45.6
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 4.4e-60 236.1 267 51.7
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 9.8e-60 235.0 279 48.4
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.0e-58 228.8 276 46.4
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.7e-57 226.9 245 51.0
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 4.6e-57 226.1 248 52.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 4.6e-57 226.1 256 50.0
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.0e-56 224.9 292 47.3
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.3e-56 224.6 254 51.2
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.5e-55 221.1 382 37.7
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 4.3e-55 219.5 355 39.7
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 7.3e-55 218.8 249 50.6
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.1e-53 214.9 251 48.2
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 1.8e-53 214.2 134 84.3
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 3.1e-53 213.4 288 46.5
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 1.5e-52 211.1 246 48.4
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 1.5e-52 211.1 246 48.8
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 4.4e-52 209.5 187 59.4
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 2.4e-50 203.8 232 50.9
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 4.1e-50 203.0 230 51.7
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 9.2e-50 201.8 252 47.6
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.0e-48 198.4 193 57.0
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.3e-48 198.0 215 51.6
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 2.3e-48 197.2 202 55.4
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 5.1e-48 196.1 487 31.0
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.2e-44 184.9 511 29.0
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 1.6e-41 174.5 272 39.7
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 3.9e-40 169.9 202 48.5
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 7.3e-39 165.6 359 35.9
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 2.2e-35 154.1 281 37.4
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 4.2e-34 149.8 104 69.2
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 3.9e-32 143.3 263 38.0
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 9.6e-31 138.7 107 66.4
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 7.6e-28 129.0 256 37.9
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.3e-27 128.3 159 47.8
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 1.9e-26 124.4 88 68.2
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 3.2e-26 123.6 266 32.7
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.5e-20 104.8 270 29.6
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 2.1e-17 94.4 148 40.5
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.3e-16 91.7 135 40.0
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 1.1e-15 88.6 51 86.3
Hund03006 Selenicereus undatus HOM05D007522 ORTHO05D009518 4.8e-14 83.2 169 33.7
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 1.4e-13 81.6 88 51.1
SMO329G0073 Selaginella moellendorffii HOM05D007522 ORTHO05D009518 2.7e-09 67.4 102 36.3
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 5.1e-08 63.2 68 47.1
SEGI_10687 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.9e-07 61.2 115 28.7
Glyma.17G090400 Glycine max HOM05D000059 ORTHO05D022504 2.5e-07 60.8 38 89.5


User provided reference genes

Program Settings